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ET13921

CSHL Arabidopsis genetrap mutant lines

Original: ET13921

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13921

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 177290 [Map]; Strand: w
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: -437; Region: promoter
    Flanking Genome Sequence: ET13921 - 3-prime edge 
    TGCTCCCTGA GCTTTCTAAA GCTTTCTAGA AATACTTTAG TAGTTTCCCT 
    ATTTCGATGG GTTACGAAAT TTAACAGAGT TGATTCAATA TCATCTCTAA 
    GATTTAAATT ATTCCCAACA GTAATGCAAT TAAAATCTAA TATCAACTAT 
    ATATTGGTTT AGTAACTAAA C

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 9598201 [Map]; Strand: c
      • AT4G17070.1 - [+] show detail - peptidyl-prolyl cis-trans isomerases
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13921 - 5-prime edge 
    AATCATCTGC CATGAAAGTT CAAAGGTTCC AGAGCGGAAG CCGCAGCCAC 
    GAATTGACTC ACCAACAACA CTCTCTCTTC TCTTTCTCTC TCTTCATTAT 
    TATTGAAAAA GATTCCAAAT TTTTCAATTT CACATGACAT GGCACTTCTC 
    TCTTCCTTTT GCTT

AT4G00400.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 8
Curator Summary
Involved in cutin assembly. Is functionally redundant with GPAT4.
Computational Description
glycerol-3-phosphate acyltransferase 8 (GPAT8); FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 4 (TAIR:AT1G01610.1); Has 380 Blast hits to 369 proteins in 27 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G17070.1

Model type
Protein coding
Short Description
peptidyl-prolyl cis-trans isomerases
Computational Description
peptidyl-prolyl cis-trans isomerases; FUNCTIONS IN: peptidyl-prolyl cis-trans isomerase activity; INVOLVED IN: response to oxidative stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Cyclophilin-like (InterPro:IPR015891), Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (InterPro:IPR002130); Has 214 Blast hits to 208 proteins in 48 species: Archae - 0; Bacteria - 43; Metazoa - 9; Fungi - 0; Plants - 153; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR