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ET13956

CSHL Arabidopsis genetrap mutant lines

Original: ET13956

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13956

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 15501097 [Map]; Strand: c
      • AT4G32060.1 - [+] show detail - calcium-binding EF hand family protein
        Distance: 0; Region: exon1 (5UTR)
      • AT4G32060.2 - [+] show detail - calcium-binding EF hand family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET13956 - 3-prime edge
    GTAGAGGTAT TTTACCGACC GTTACTTACC GTTTTCATAA GAATCTGCGA 
    AAAATAAGAG AGAGAGAGAG AGAAACAGGA TCATTCATTA TGCCCGCCTT
    ATCTCACTAC AGATCAGTAT CATCTCTACC GTCCGTTGAC CGATCATTCC
    TTCTCATCCA ACGACTCAGG ATCCACGGCA GCTCTTCTTC CTTCCCTGAA
    TCTTCTCCTT CTGCGTCTAT TCTCTCCGGC GCAGATCCGT TGAAGCGTAC
    GGTCTCTGGC GGATCTCTTG CTAAATGGAT CACCGGGATT TCAGCTGGAT
    CCGCCTTAGG GTTTCTCTAT TGGTCCTCTG GTTCTTCTGA TTCCATCTCT
    GGTTTGTTTG GTGGGAGTAA TTTATTGTCC TTCGCTGATA GTTCAACGCC
    TTCTGTTTGT GGTGTAAAAG TCGGCGATCT GAAACCGAGA TCGTTTATTC
    CGAAATTGTC GTTGCCTGGT TACAGCTCTG GAT

AT4G32060.1

Model type
Protein coding
Short Description
calcium-binding EF hand family protein
Computational Description
calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1138 Blast hits to 1114 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 850; Fungi - 83; Plants - 103; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G32060.2

Model type
Protein coding
Short Description
calcium-binding EF hand family protein
Computational Description
calcium-binding EF hand family protein; FUNCTIONS IN: calcium ion binding; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); Has 1096 Blast hits to 1078 proteins in 164 species: Archae - 0; Bacteria - 0; Metazoa - 829; Fungi - 82; Plants - 97; Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink).
Link
InterPro Scan - TAIR