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ET13962

CSHL Arabidopsis genetrap mutant lines

Original: ET13962

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13962

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21917242 [Map]; Strand: c
      • AT5G53990.1 - [+] show detail - UDP-Glycosyltransferase superfamily protein
        Distance: -93; Region: promoter
    Flanking Genome Sequence: ET13962 - 3-prime edge 
    ATTTTACCGA CCGTTACCGA CCGTTTTGAG AATGTGCTCG TGGAAGTCTT 
    TGAAGGGTGT TTTAGGTTTA TTTATTAGTG AGGGTTGGTG GTTTAGTTGG 
    TGAAAGTAGT GGTTAACATG TGTTAAAATG ACCTTTGTTT TTATTAGAAA 
    AGTTGTCTGA TCTAAACATT AATGTAATGT AATGCCTCGA GAAAATACAA 
    TGCTGCGTGT CAAAAAGTCA AAAGTAATAG ATCTTATGAT AATATGACAT 
    ACCAGGTTTG ATGACGCGTG TTAATCTGAA CCAGATCAGC CTGGCCAAAA 
    CATTAGTAAA ACATGAGATG AAGAAAAATA AAGACAAAAA CAAACTCTCA 
    AGGCAGGTTG TTCGTTTAAC CTTCTAAAGT CACTATTTGG TTCAAAATCT 
    TTTAGATAGA TCGTCTAACA ACACTTAAAC ATACCCAAAT GAGGGTTTGA 
    TATTATTGGC AACACAAGAC AAATGAAATA TCACGTTCCA ACAAAGAAAG 
    CAAACGGGAT CTTATTTCCA GGATCAAGTA ACTAAAGAGA CATGTGTATT 
    TT

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 21895292 [Map]; Strand: c
      • AT5G53930.1 - [+] show detail - unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 protein...
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET13962 - 5-prime edge 
    TAGGTGAATC TATTGACTCT TATTCTAGAA TTCGTGCTGA TGACAACGGA 
    TTTGGGGAAT ATAATAAATC TGAAACTAGC AAAGTTTCTC ATACAGACAA 
    TAGCTTGAAA GATGATGATT TGGAAGCCAT TCTAAAGAAA AGAGCTCTGG 
    AGAATCTTAA AAGATTTCGT GGAGTGACCC AAAAGAGTGG AATAGCTAAA 
    AAAGAGGTGT CTTCTGTTTC AGAAGGAGAA CCTATGCAAA TTGAATCTGA 
    AAAAGTTGAG TCACAAGACC ATGATCTCAT GGAGCAGAAA CTTTGTGATT 
    CTGCTGTAAG CAAAGATCTT GAGAATTCAG AAAAGATTTT ACATGTTATT 
    AATGTTAAGG AATCTGGAAC AGCATTGGCT AATTCTGCCT CGCAACAAGA 
    TCAGCAGTCT GGTGATACTG CCAAGGTTAA AGTTAGTTCT GGTCTTAGCT 
    CTTGTACAAC CAAACGAAAG TTGGTTAGAC CGGTATTGAG TAAAGATAGT 
    TTAAATCTAG CTAGCAAGAA AGAAGCTAGT GGTAGCCAAG ATGCTGAAGC 
    AGAGAGCATT GATGGCAGTA CCGTTGACAA GAATTGTTTA GAAAGTACTC 
    TAGCTTTGGT AACAAAGAAT GAAGGTGAAC ACATAGAACC AACAAAAGTT 
    AGTTCTACGC TCAACGCAG

AT5G53930.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: chloroplast; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G53990.1

Model type
Protein coding
Short Description
UDP-Glycosyltransferase superfamily protein
Computational Description
UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G64910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR