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ET13995

CSHL Arabidopsis genetrap mutant lines

Original: ET13995

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET13995

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18352513 [Map]; Strand: c
      • AT2G44460.1 - [+] show detail - beta glucosidase 28
        Distance: 2547; Region: intergenic
      • AT2G44470.1 - [+] show detail - beta glucosidase 29
        Distance: -1673; Region: intergenic
    Flanking Genome Sequence: ET13995 - 3-prime edge
    CGGTAGAGGT ATTTTACCGA CCGTTACCGA CCGTTTTCAT CCCTATCTGT 
    ATTATGTTAG GAAACTAATA TTACCTGAAT TGATTAGTCT AATTATTATA
    TTTAATAGTC ATCCAAAAAT AATAGAAAGC ACTAGAGAGT AGAGAGAGTG
    TCGACCAACA CTTAAGAAAA AAAAAAAAGG GGAAAAGGGG TTAAAATTGG
    GGTGGGGGGA AAAAAAACTT GTAAGGGGGG GTGCGGAACC CTTAATTAAA
    GGGGAAAAAA AAAAACCGGG GGGTGTTAAA AAAGGGCCGA AAAAAAAAAA
    AAAATTT
  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18352452 [Map]; Strand: c
      • AT2G44460.1 - [+] show detail - beta glucosidase 28
        Distance: 2486; Region: intergenic
      • AT2G44470.1 - [+] show detail - beta glucosidase 29
        Distance: -1734; Region: intergenic
    Flanking Genome Sequence: ET13995 - 5-prime edge
    CTTTCTCCCT GAAACAGAAC ATCTGTATAA AAATTACACA TAACTTTTAT 
    AGGAAACAAA GTGTATTTAT GATATTTTAT TTTACATTAA AGTTTTAGTT
    TAACTGTTTA TTCAAAGATT GATGACAATA TAATTTTCTT TAATATAGTT
    GAAAATTAGA GAAAGGAAAG GTGATTTGCG TCAAATAATT GTTTTTGGTA
    CTATATATCT TACTTCCTTT CATGGCCATA TTTCTTTGTT TGGTACTCAC
    CCTCAAGTTT GCGCATTCCA AGTTTTCCAT AAAACTTTTT GACTTACTAC
    GCTTTGGTAA ACTACTAACT TAAGTTGGCT AAATAATCCC TAAGAATATA
    TGAGAATTTA TCTTATGTGT TTTTTCCTAT CGTAATTGGA TGGTTAGATA
    TTATTATTTG GTGCATGATC GATCTTCTCG AAAATTATTT AGGACCCATT
    AACTTCGTAG TTATGTTATG AAAAAAATCA ATTGATTCAA TAAGTTTAAG
    CAATAGTGTG TTAGAATCTG ACTTACGAAG CTTCTTAGCT TTAGTGGTGT
    TAGACTCGGT TCTAGAAAGG AAACAGGTCA AGTTTATGCT TATGGCCCTC
    AATATCTAAG CATAATTCTA TCGCTAATGA AGCTTCAGTG CTTGGTAAGA
    AATACAAAGA GAAGAAAGTG GTCAAGAAAT TGCCACCAAA ATT

AT2G44460.1

Model type
Protein coding
Short Description
beta glucosidase 28
Computational Description
beta glucosidase 28 (BGLU28); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: response to karrikin; LOCATED IN: membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 29 (TAIR:AT2G44470.3); Has 11295 Blast hits to 10946 proteins in 1460 species: Archae - 142; Bacteria - 7777; Metazoa - 711; Fungi - 201; Plants - 1461; Viruses - 0; Other Eukaryotes - 1003 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G44470.1

Model type
Protein coding
Short Description
beta glucosidase 29
Computational Description
beta glucosidase 29 (BGLU29); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 28 (TAIR:AT2G44460.1); Has 10856 Blast hits to 10587 proteins in 1468 species: Archae - 140; Bacteria - 7715; Metazoa - 686; Fungi - 195; Plants - 1406; Viruses - 0; Other Eukaryotes - 714 (source: NCBI BLink).
Link
InterPro Scan - TAIR