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ET14053

CSHL Arabidopsis genetrap mutant lines

Original: ET14053

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14053

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 257444 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: -804; Region: promoter
      • AT5G01690.1 - [+] show detail - cation/H+ exchanger 27
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14053 - 3-prime edge
    TGAAACGGTA GAGGTATTTT ACCGACCGTT ACCGACCGTT TTCATCCCTA 
    CTCCTCCGTA CTGAAAAGTT TTGGTGATAT TTTCCATTCC CTCCTGCTAG
    GTATTTCCCT AAAGAGTTAA GCCATAGAGG GAAAGAGAGA GATTGTGTTG
    TGAGTTGAAG AAAAGAAGAA AGTATTAATT ATTCTCTCTT TTTTTTTTTC
    CGGCCCCCCC AGCCAATTTT AGGGGGTTAA ATGGACCGGG GGGTTAACCC
    CCTGGTCCTT ATTTCCCCTT AAGGGGCCCC CCCCCTTTAA GGGTTTCCAA
    AAAGGGTTTT CCGGGGGGGA CAAAAATTTT GGGGCGGGGC CGAAGGACCT
    TCTTTTTCCC CGGAATTGGT TGGCCCAACC TGGGGGGTTG GAAAAAAATT
    TTTGGCGGGT GGGGGTTAAA AAAACCACCC AGCCCCCAAA TCCCTGGAGG
    TTGGTCCCCT ACCAAAAACC ATTATTATTT AAAACCCCCC CTGCTTGGAA
    AACCCCCTAA AAGGTTTAAT TTTTAAAAAA TTAGGGGCCA ACTAAAAACC
    TTTAAACCCT TATAAACCGG TTTTAAAAGG GGGTATTCCC GAAATTTAAT
    TTTGCAAAGG GGAAAAAGGC CAAAAAAAAT TCCCAATTTT CCCCGGCGGG
    TTTAAAGGCC ACCCCAAAAC CTTGGAAAAC CACCAAAACT TGTTAAAAAT
    TTAAAAAAAA ACCCTGGTTT TTTTTCCCCC GGTTAAAAAG GTTGGACCGG
    TTGCCC

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G01690.1

Model type
Protein coding
Short Description
cation/H+ exchanger 27
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 27 (CHX27); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 26 (TAIR:AT5G01680.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR