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ET14064

CSHL Arabidopsis genetrap mutant lines

Original: ET14064

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14064

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8663334 [Map]; Strand: c
      • AT4G15200.1 - [+] show detail - formin 3
        Distance: 0; Region: exon7 (CDS)
      • AT4G15200.2 - [+] show detail - formin 3
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: ET14064 - 3-prime edge 
    GAAACGGTAG AGGATTTTAC CGACCGTTAC CGACCGTTTT CATCCCTATC 
    TGCACGTTCT ATAAATCCAG CTAATGCTCG TTCGAAATCG CTCTCTTCAT 
    CCATTGTTTT CAAAAACTCC CTCGCATTCG TAAGTGAACC GCTTATATTC 
    GCCAATGTTG CAGCCAAACC ATCAGCGTCT ATGATGGCTG CTCTCTTGAC 
    ATCTTCAAGC TCTGTCGTTA ACCCCGTAAC CACTTGAAGA CCTGTGCTGC 
    GGTAACGCTC CACAGATTGT GGACTAGAAT CCGCGTTTGA ATCATCGGTT 
    TTAACGCTTG AGAAGCTTCG GCTCTGAAGG CGAAGAGCAC GAACGCCTTC 
    GGAACGAATG ATCTCAAGAA CAACAAAATG TAAAAGTGTA GTTTTGCCAT 
    CAGTTCTTTC CACTCGACAA AGCTTCAAAA GAGTATCGAG CTTGAAAGCC 
    TGCGCATCAC CGCGGAAAGT TCCAACATTC ATTCGATTCC CTGTCTTGAG 
    AACTGCCTCT AGTAGTTTTA AAAACAGTCT GCTGTTTCTA AGTTTCTTGC 
    AAGCCACCTG ACATAAACAA AGACACAGTG ATATTAGAAT AGTGATGGTA 
    GATTCTTGTT TTCAAGTATG TTTGGTCAGT GACTTACCTC GAGAGTTCCG 
    AGAGCTTCTT TGAGGCCAGA GACTTCTTCT TGAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 8663280 [Map]; Strand: c
      • AT4G15200.1 - [+] show detail - formin 3
        Distance: 0; Region: exon7 (CDS)
      • AT4G15200.2 - [+] show detail - formin 3
        Distance: 0; Region: exon6 (3UTR)
    Flanking Genome Sequence: ET14064 - 5-prime edge 
    CTACTTTATC CCTGCGTGCA GATGCTGATA TTAAATGGTT GAAGGAAGAA 
    GAAGAGAGAA TCATGGTGTT GGTGAAAAGC TCTGCTGATT ATTTCCATGG 
    GAAGTCTGCG AAAAACGAAG GATTACGTTT GTTCGCTATA GTGCGCGATT 
    TCTTGATAAT GTTGGAGAAA GTTTGCAGAG AAGTTAAGGA AACTACAAAG 
    ACGACGAACC ATTCCGGTAA GAAGGAAAGC GAAATGACGA CTTCGGACAG 
    TAATCAACCG TCTCCGGACA TCCGACAACG TTTGTTTCCA GCGATTGCTG 
    AACGAAGAAT GGATAGTTCG GATGATTCAG ACGATGAAGA GGATAGTTCA 
    CCTTCGTAGT CTTTTGATTT CACTAACGTT ACTAGTGAGT TTGTAGCTAA 
    TTTGAAGACC AAAGATGTTC GATATTACTC TGTTTACTTG AAAATCTTAT 
    ATAATCGTAT ATTTGTAAAA CTATTTCCCA ATTCGTGAAT TAAAAGATAG 
    ATGATACTCA TTTCTTAGAT GTCGATGGAA AAAAATAGTG TTTGATAAGA 
    ACTTTTTCTT TTATGTCTTT TGAATCTTAA ATAAAACAAG GATACGACTC 
    AATGTGGTAT ATAGGTTGGA TTTTGCGAGA TGTGAAGAGA GATATGTATA 
    GAGCCAAAAC CTTGATTCTA GCTGTGAAAG AGCTACCATG TTGGCCAAGG 
    CTTCTAAGCT ATAAGAGTGA GATCATTGGC TCAAAGGAGA AGGTTTTCG

AT4G15200.1

Model type
Protein coding
Short Description
formin 3
Curator Summary
Actin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes.
Computational Description
formin 3 (FH3); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology5 (TAIR:AT5G54650.2); Has 4532 Blast hits to 3854 proteins in 397 species: Archae - 0; Bacteria - 318; Metazoa - 1880; Fungi - 396; Plants - 835; Viruses - 88; Other Eukaryotes - 1015 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G15200.2

Model type
Protein coding
Short Description
formin 3
Curator Summary
Actin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes.
Computational Description
formin 3 (FH3); CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin homology5 (TAIR:AT5G54650.2).
Link
InterPro Scan - TAIR