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ET14103

CSHL Arabidopsis genetrap mutant lines

Original: ET14103

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14103

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14470828 [Map]; Strand: w
      • AT2G34270.1 - [+] show detail - unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bac...
        Distance: -952; Region: promoter
      • AT2G34280.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14103 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACCG 
    GATACTTCCT TACCAAGATC CTGTATATGT AGATGGGTCA CTTCATTGGC 
    TCACTGAGGG TGAAACCACC AATGTTTTGT CTTTCGATCT TCATGCCGAA 
    ACTTTCCAAG TCGTGTCTAA AGCTCCCTTT CTCCACCACC ACGACTACTC 
    TAGTAGAGAG TTGATCATGT GCAACCTTGA TGATCGTTTG TGCGTATCAG 
    AAAAAATGTG GCCCAACCAA GTGATATGGT CGTTGGATTC AGATCACAAG 
    ACATGGAAGG AAATATATTC CATAGATCTC AATATAACTT CTTCTTTGTT 
    TGGGAGTAAT GGATTCGCAC TCAGACCACT AGGAGTTTTT GACAAAGACA 
    AGTTGTTGTT TTGTGAACCT GAATACGGGG ATCAATTGCT AACACATGAT 
    CCCAAAACAA AATCTTATGA ATTTGATTAC AGATTTTTTT CCCCTACTAC 
    TGCACTCCCT CTTTGTTATT TCCAGAGTTT AATCTCTATT TTCTAATGCT 
    TTTTAGTTTT CCAAAACATT GTAATTTCAA AGTTTTAATA ATCTCAAT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14470885 [Map]; Strand: w
      • AT2G34280.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET14103 - 5-prime edge 
    ACTTTATCCC TGGTATCCGG TAGGGGGACG CCGGGACAAC AAACCTCCAA 
    GCCTTGGTGG TAAAATCAAA AACTTCACAA AAAGTACTAG TGTTGTTGTT 
    GCCTTGACAA ATCATACTAA TGTTGTTTTT GTCTTCGTCG TCGTAGTCCT 
    CGTCGTCATC GTTAAGGCCG CCTAATTCAG CAGAATTATA TAACCAAACT 
    GGCTTGTATG TGCCATTGAT TTTGTCTTTA CCGAATCCAA GCTTAGCCCA 
    TGATACTGAA CCGACCTGGT GTTCATCTCA CTCGA

AT2G34270.1

Model type
Protein coding
Computational Description
unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G34280.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box associated ubiquitination effector family protein (TAIR:AT4G01640.1); Has 932 Blast hits to 918 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 930; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR