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ET14110

CSHL Arabidopsis genetrap mutant lines

Original: ET14110

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14110

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1147861 [Map]; Strand: w
      • AT4G02610.1 - [+] show detail - Aldolase-type TIM barrel family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET14110 - 3-prime edge 
    ATGAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTTCATCCCT 
    ACCAGCTGTG ATATATGGAA TCAGAGCCAC CTACAAAATT GTTTTCAACA 
    ACAATCAAGA ACAAATCGAA TAGAGAAAGG AAATAAAAAT TGAAACTTTA 
    GGGTGATTGA AGAGAGAATT TACTTACTTT GCCTTGTGAC TTTAACCTAG 
    CGAATGTTTC TGATAGACCA ACCGTGGAGG AAGGAGTCTT GAGAAGATCC 
    ATTGCAAGCG TTCGAAGAAG AGACTAGCGC GAGTGACTAG TGTGGCTTTA 
    ACTCTCGTAC AAAAGTAAAA AGCAGAGAGA TAAAAGGAAT ATTAATTTGG 
    AGCCGGTTTA ATCATCCAAA CCAAACTAAA ATTAACCGGT TTAACCTAAA 
    TCATATTTGA TTGCTTACTG TACAACAAAT CCAAAGTCTT GAAATTTAAA 
    TGTACTTTTT CCAACACATT GTAAGAAACC AAATTCCAAC TGAAGAATAT 
    TTTTGGTTTT TCGTTGGTTT CAAATTTCAT TACCCAAAAC CAAAATAATT 
    GAACAGAAAC ATATCCATGG GCATCCACAA TGTTCCAAAT AATACAATAT 
    ACAAACAGAT TCAATTTCCC AATTCTAATC CAAAGATGGT AACTTTGTAA 
    CAAAACAAAA AAATCAAGTC ACTATAACTT ATGTATAAAC CACAAAACCG 
    GACCTTGAAG CTAAAATCTG ATGATGATCC TCTAAATGGA AAAATAATAT 
    CTCTGCTCAG TTGTTATGAT CA

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1147910 [Map]; Strand: w
      • AT4G02610.1 - [+] show detail - Aldolase-type TIM barrel family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: ET14110 - 5-prime edge 
    TCCTACTTTC TCCCTGACAG CTGGTGATCC TGATCTTTCT ACAACAGCGA 
    AAGCTCTTAA AGTGCTTGAT TCGTGTGGCT CCGACATAAT CGAACTCGGT 
    GTTCCATACT CTGATCCATT AGCTGATGGT CCAGCAATCC AGGTTCGATC 
    CTCAAAAGCT GCACATTTCA ATCATCTTCT GAATATTGAA CTTTCTCTCT 
    TTCTTGTCAT ACGCTGCTGC GAGACGTTCG TTACTTAAAG GAACCAACTT 
    TAACTCCATT ATCTCTATGC TTAAAGAGGT GTGTGTGGTT TGTTTTGTTT 
    ACTTACAGCC TCTCTTAGTT GTTTAGATTA CATATGATGA AATTACAACT 
    CTCATTGTTG AGTAGATAGT GGATTTTTTT TTGTTTTGGT TTTCTTACAA 
    AGGGACACTT TTTATTCCAA AATTTCTTCA GGTTATTCCT CAGTTATCTT 
    GTCCAATTGC ATTGTTTACA TATTACAATC CAATCCTGCG ACGAGGAGTA 
    GAGAACTACA TGACTGTTAT AAAGAATGCT GGAGTTCATG GTACATTGAC 
    ATTTTCAATT TTTCTCCCAA GTAAAATACT TATATGCTGT TTCAGGGCTC 
    AGTTTTGACG TCATTTGCTT CCATTTATTC TTAGTTC

AT4G02610.1

Model type
Protein coding
Short Description
Aldolase-type TIM barrel family protein
Computational Description
Aldolase-type TIM barrel family protein; CONTAINS InterPro DOMAIN/s: Tryptophan synthase, alpha chain, active site (InterPro:IPR018204), Aldolase-type TIM barrel (InterPro:IPR013785), Ribulose-phosphate binding barrel (InterPro:IPR011060), Tryptophan synthase, alpha chain (InterPro:IPR002028); BEST Arabidopsis thaliana protein match is: tryptophan synthase alpha chain (TAIR:AT3G54640.1); Has 7706 Blast hits to 7706 proteins in 2293 species: Archae - 225; Bacteria - 4607; Metazoa - 6; Fungi - 175; Plants - 137; Viruses - 0; Other Eukaryotes - 2556 (source: NCBI BLink).
Link
InterPro Scan - TAIR