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ET14121

CSHL Arabidopsis genetrap mutant lines

Original: ET14121

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14121

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 7849818 [Map]; Strand: c
      • AT4G13494.1 - [+] show detail - MIR863a; miRNA
        Distance: 2919; Region: intergenic
      • AT4G13500.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 6949; Region: intergenic
    Flanking Genome Sequence: ET14121 - 5-prime edge 
    CCACTTTCTC CCTGTTCACA TCATATTGTC TCATGAGAAT ATTACATATT 
    GCCTTTGAAC TTGGCCAAAA ACTTTCTTTT TCCTTCCACA TCTAGGTTCA 
    CGTAAGTGTT TTTTACAATG ATACAATAAC ATAACTTCAA TACTTCATAA 
    ACTAAACATA AGTTAAATAC TTCAGTTTAA TATTAAAAAC CATGGGCAGT 
    CCATGGTTTT AAGACCCAAA TGACAACTCT ACGTCAAAGT TCTTTAACAT 
    CAATAATCTT AAGATCAACA AGTTCCAATT GAACATTAAA CCCTTAAAAG 
    CATCAGAGAA TTAAACCAAT AGGAGGTGAA AGAGAAAGAC AAAAGCAAAA 
    AAGGAGAAAA AGACTTATAT AAATTGGAGC CATTGAAGGG AAAGACCAAT 
    TCCTCTTTAA TTTCTCAAGA ACCAACGACA AAGACAAAAT AAAACAAATA 
    GATTTATTTA CAATCTTTCA GCCTTTCAGG TGATAGACTA ACATATATAA 
    ATCAATAACC TTCATGGAAG TTATAATTTT GATTATCAAA AAGATATCTG 
    CCTCTTGACA ACTGTGAAGT AGGTGAGGAG GTAAAAGATA GATAAGTTGT 
    GACCCTAACC TTTGAAGAAA CAAACACAAG TCTTAGTGGC CAACTTTTCT 
    AATGGTAGAT TGCAAGTTGT GCTGATTTAT CTCTAGGCT

AT4G13494.1

Model type
miRNA
Short Description
MIR863a; miRNA
Curator Summary
Encodes a microRNA of unknown function. MicroRNAs are regulatory RNAs with a mature length of ~21-nucleotides that are processed from hairpin precursors by Dicer-like enzymes. MicroRNAs can negatively regulate gene expression by attenuating translation or by directing mRNA cleavage. Mature sequence: UUGAGAGCAACAAGACAUAAU
Link
InterPro Scan - TAIR

AT4G13500.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR