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ET14254

CSHL Arabidopsis genetrap mutant lines

Original: ET14254

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14254

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22760632 [Map]; Strand: w
      • AT1G61660.4 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
        Distance: -4332; Region: intergenic
      • AT1G61667.1 - [+] show detail - Protein of unknown function, DUF538
        Distance: -7031; Region: intergenic
    Flanking Genome Sequence: ET14254 - 3-prime edge 
    TCAAACACTC TACAAATGGT GGGATATTAC ATTTGCGCAC ATCTATTATG 
    GAGAATGAGT GGCATGGAAT AAATTTTAAA TTGATAAATT ACCAAAGAAA 
    CCATAAGAAC ATTATGTT

AT1G61660.4

Model type
Protein coding
Short Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT3G20640.1).
Link
InterPro Scan - TAIR

AT1G61667.1

Model type
Protein coding
Short Description
Protein of unknown function, DUF538
Computational Description
Protein of unknown function, DUF538; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF538 (InterPro:IPR007493); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF538 (TAIR:AT5G54530.1); Has 441 Blast hits to 441 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 440; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link
InterPro Scan - TAIR