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ET14271

CSHL Arabidopsis genetrap mutant lines

Original: ET14271

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal (unconfirmed)
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET14271

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 534047 [Map]; Strand: w
      • AT4G01270.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon7 (CDS)
    Flanking Genome Sequence: ET14271 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTTGACT GTTCTCTCTC 
    TCTTCAGTTA TCAACTCAAG TTCCCTCATT CGTTTCTGGT CATAGAATAA 
    ACATAATAAG AGCCAGATAT AGAAGACACA AAGAAGATCG AGATAAACAC 
    CAAAACACAC ACCTTTAGTT TTTCTATCTT TTCCAAAGCT TTTTCAAGTT 
    TCTCAGAAGA TCGTGCTTCG CCTCTTCCCA GCTGATTGCA CAGCACTACC 
    AACACCTTA

AT4G01270.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01245.1); Has 5689 Blast hits to 5015 proteins in 477 species: Archae - 145; Bacteria - 387; Metazoa - 2946; Fungi - 366; Plants - 512; Viruses - 10; Other Eukaryotes - 1323 (source: NCBI BLink).
Link
InterPro Scan - TAIR