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ET14309

CSHL Arabidopsis genetrap mutant lines

Original: ET14309

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14309

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26768392 [Map]; Strand: c
      • AT1G70990.1 - [+] show detail - proline-rich family protein
        Distance: -316; Region: promoter
    Flanking Genome Sequence: ET14309 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTATATACAC ACTCTACCCG 
    ACCGTATCGA ATCGGAATAT ATGTTCGATG ACAACAAGAT TGATCGTAAT 
    CTGAATTAAA AAGCTAAAAG CATAAATGTA TATGACTCTG TAGCCTGTAA 
    AATCGTTGCT AAAGCGTGAA TTGGTCGCTT TTTCTATCAT ATGATAATCC 
    TTAATTGTAT TGTATTAGAT GAGAAAAAAA AAACGTTCCA ATTTGGTAAT 
    GGTGAAAAAA TAATATTTAG GAAAAAAACT ATCCTCCGGC GCCTCTATAC 
    TGAATCCCAG GACGGTCCTT TGGGTAGCAA TTGCCCATGC GGGGGGAATA 
    AATGAATGAG TTGACTTACG GCCCCATACT ACGCAACGCA AATTGCTCCA 
    AAAATTTATT ATACCAAATA TATGTTCTAA CAATTCCCCA AACTTAAAGG 
    CTCTTATTTC TGTTAAAAAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 154366 [Map]; Strand: c
      • AT2G01320.3 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon12 (3UTR)
      • AT2G01320.2 - [+] show detail - ABC-2 type transporter family protein
        Distance: 0; Region: exon12 (3UTR)
    Flanking Genome Sequence: ET14309 - 5-prime edge 
    GCTTTAAACA ATGTAAGACT CGACTAATCT CCTGTTTAGC ACTAATTATT 
    CATAAGTTTG TATTAGATTT AAGAGAAGAA AAGGTCTAAT GCGGTGACTT 
    CCAAAAACAA TGTGAGGAAG GAGAGAAAAC GTATAGAGAG ATGTGGGGAA 
    CTTTGAACAT TGCTTGAAAA CTCAACTGTG CTAACGTCAG GATCGACTTC 
    TGAAGAAGAT TCCGATCCAA CCAAACTCAA ACTTTAGATT GTTTAATTAT 
    TATACTAATA ACCGAATTAA TTTCCCTAAT TAAATAAGAT CATAAGTTTT 
    AAGAAGCCGC CCATTGGGAA AAAGTCAAAT ACACACCATC CGATTCGTGA 
    GAATGGGACG TGGCGTCCGG TCCAAACATT CTCGTACCTT ACGTTGCCTG 
    CATTCTAGAC ATCTAATAAT TGATAATTTC ATTTACGCTA AACCGATAAT 
    TTTACAATGC AAAAACTAAT CAACAAGATT ATAAAAAACT CTCTAATAAT 
    TATTTATTTT TTTTTGTAAA TTTGGAAC

AT1G70990.1

Model type
Protein coding
Short Description
proline-rich family protein
Computational Description
proline-rich family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G23040.1); Has 16801 Blast hits to 6974 proteins in 537 species: Archae - 26; Bacteria - 1654; Metazoa - 5189; Fungi - 1184; Plants - 5387; Viruses - 1054; Other Eukaryotes - 2307 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.2

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387358 Blast hits to 354249 proteins in 4108 species: Archae - 7085; Bacteria - 307995; Metazoa - 8597; Fungi - 6708; Plants - 5391; Viruses - 19; Other Eukaryotes - 51563 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01320.3

Model type
Protein coding
Short Description
ABC-2 type transporter family protein
Computational Description
ABC-2 type transporter family protein; FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC-2 type transporter (InterPro:IPR013525), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC-2 type transporter family protein (TAIR:AT3G25620.2); Has 387349 Blast hits to 354243 proteins in 4108 species: Archae - 7085; Bacteria - 307989; Metazoa - 8597; Fungi - 6708; Plants - 5387; Viruses - 19; Other Eukaryotes - 51564 (source: NCBI BLink).
Link
InterPro Scan - TAIR