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ET14350

CSHL Arabidopsis genetrap mutant lines

Original: ET14350

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14350

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 167780 [Map]; Strand: c
      • AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -521; Region: promoter
      • AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -533; Region: promoter
      • AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -527; Region: promoter
      • AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -533; Region: promoter
      • AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
        Distance: -217; Region: promoter
    Flanking Genome Sequence: ET14350 - 3-prime edge 
    TTTCATCCCT AATGGTACAC CTCTGTATCA AACATTTATG GCTTCTTCTC 
    ACTCGACTAA TGCAACTATC AGTCGTGCAG TTACACTTTC AGAATATTTG 
    CTAGGTTGTC TTAGTAAAAG CATAGAGATA TAATAGGAAA CCGTCCAAAC 
    ACTTTTGGGT TTGACAATAG TTGGCACAGT ATCTAGTACT GATTTTGTCT 
    CTTAATGACT ACTAATAGTT GGCACAGTAT CTTGGTTATT TACTTGGCTT 
    CGTTGGCTCT TGATTACAGC TTGGAAATGG GAATTCATCT TGAGAAGTCA 
    GCGTATCTTG CGTTAGCTGG TAACTTTCTG AGATCAAACG AGCTCTCTAA 
    AGTGATTGAT GTGGTCAAGG AGATGGTGAA ATCCCAACAC TCGCTTGGTG 
    TGTACCATGG AGCAATGCTG ATCCACATGC TCGGGTTTGG GAGAAGACCT 
    AGCTTAGCTG CAGAGGCTTT AGACTTACTT CCGGATGATC AAAAGGGTCT 
    ATCTGCTTAC ACTGCGCTGA TGGATGTTTA TATCTCAGCA GGGAGTCCAG 
    AGAAAGCAAT GAAA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 167661 [Map]; Strand: c
      • AT2G01350.1 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -402; Region: promoter
      • AT2G01350.2 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -414; Region: promoter
      • AT2G01350.3 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -408; Region: promoter
      • AT2G01350.4 - [+] show detail - quinolinate phoshoribosyltransferase
        Distance: -414; Region: promoter
      • AT2G01360.1 - [+] show detail - pentatricopeptide (PPR) repeat-containing protein
        Distance: -336; Region: promoter
    Flanking Genome Sequence: ET14350 - 5-prime edge 
    ACCTGCATAG TTAGGAGTAA ACAATTGAAA GATGAATTTA GCCAAGCAGG 
    AATAACAAAC AGTTTAAAAT TTTGTAATCG ATCCAGGGAG TGTATTTACT 
    CAAAGAACAG ATCAAGGACT CTTCTAATAG CTCCTGAGCT AGCTAGTTCT 
    TTTCCTATTG CTTCACTTCG AGTTTTCAGT AAGACATGAA TGAACTCCAC 
    AATCTAAGAC AAGCCATCAG CAACACAAAC GAAATCAGAA ATATATTACA 
    CAACAGAAAA CACACACAAG ACACAAGAGT ATATGTTTTG AGTTAGAACT 
    CCGTACTTGT TACATGTTTG AGTGTTATGT TTTATGTTGA ATTTAACTAA 
    AATGGAAACG TTAGTATGGA ATGGGCTTCA CAAATAAAAG CCCAATAGTA 
    TGTTTTTTTG GTAGGGAGCC CAATAATATG GTGGTTCACC CAAATATCAT 
    TTCTTTCTCT GAGAGCTGTT TATTATATTC ACACTCAGAA GACCAACAAG 
    AAACAGAGTT GAATGCAGTT CTACCATGAT CTCTGTCTCT CGATTCTTGT 
    CGCGCTCAAT TCTACGCAAT TCCGAGGTTT TATCCGACAA AACCCAATCT 
    TTTAAATCTC TCCTTTGT

AT2G01350.1

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5853 Blast hits to 5853 proteins in 1914 species: Archae - 184; Bacteria - 3582; Metazoa - 59; Fungi - 129; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.2

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.3

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5825 Blast hits to 5825 proteins in 1916 species: Archae - 184; Bacteria - 3588; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1813 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01350.4

Model type
Protein coding
Short Description
quinolinate phoshoribosyltransferase
Curator Summary
At2g01350 encodes quinolinate phosphoribosyl transferase involved in NAD biosynthesis as shown by heterologous expression in E. coli.
Computational Description
quinolinate phoshoribosyltransferase (QPT); FUNCTIONS IN: nicotinate-nucleotide diphosphorylase (carboxylating) activity; INVOLVED IN: NAD biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Nicotinate-nucleotide pyrophosphorylase (InterPro:IPR004393), Quinolinate phosphoribosyl transferase, N-terminal (InterPro:IPR022412), Quinolinate phosphoribosyl transferase, C-terminal domain (InterPro:IPR002638); Has 5862 Blast hits to 5862 proteins in 1918 species: Archae - 184; Bacteria - 3596; Metazoa - 59; Fungi - 124; Plants - 57; Viruses - 0; Other Eukaryotes - 1842 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G01360.1

Model type
Protein coding
Short Description
pentatricopeptide (PPR) repeat-containing protein
Computational Description
pentatricopeptide (PPR) repeat-containing protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT2G01390.1); Has 425 Blast hits to 414 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Link
InterPro Scan - TAIR