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ET14356

CSHL Arabidopsis genetrap mutant lines

Original: ET14356

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14356

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 479277 [Map]; Strand: w
      • AT1G02380.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 306; Region: intergenic
      • AT1G02390.1 - [+] show detail - glycerol-3-phosphate acyltransferase 2
        Distance: -1575; Region: intergenic
    Flanking Genome Sequence: ET14356 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATAGC AGATAGACCA 
    GCCATACAAT TCATTTTCTT ATCAAAAAGA AATTTTCTAT ATTTAGTAGA 
    ACAATTGTGG CTTTTACATG TAGAATTTAT TTGTGTAGGG TTTGAAATGT 
    TTGATATTGT TATATACCAT AAACGTTGCA GAATCCAATT GGTATGGAAG 
    TCATTTTCAG ATTCGCATTG AAAAAAACAA TTGTTTTTTT ATATTTGTAA 
    GGTCAACAAC AAGTTTTACA TCATTTTTCC CTTCATTAAA TACCGTAATT 
    ACTACGATGC TCACAATCTT TTTATTTTCA AAATAATTGA AAAACTGGCC 
    CGGTTAGTGA CATATCAATA TATCATCATC ATTGTTTAAA ACGCAGTCGT 
    TTTTACAAAT TTTAGTCTAT GAACAAAACT TTGACCAAAT GAGTTAACAG 
    TTTGGGTCAA GAAGACCAAA ACAGAGAACT CATCTAGTAA CGTCTCTCGA 
    GT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 479346 [Map]; Strand: w
      • AT1G02380.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 375; Region: intergenic
      • AT1G02390.1 - [+] show detail - glycerol-3-phosphate acyltransferase 2
        Distance: -1506; Region: intergenic
    Flanking Genome Sequence: ET14356 - 5-prime edge 
    CTTTCTCCCT GATCTGCTAA GTGTTACCCT GCAAGAGATA GTAATCCGCA 
    AAATCATTTT TGTCGTATAT GATAATTATG GAAGTGTAAT CAACACATTT 
    TATAATGTCA AGATTAGCAA CTTTTGTTTA GTATATATCT CTTCAATTGA 
    GTTTTTTCCC CAACTAAACT CAAAATTGTA TTATCTAGCA GGGTGGAAAT 
    TTTGTTTCTT TAATCGGTTG ACTTACTGAT AATTCCATCA CCAACGATAT 
    GCTTTCGATC GTTTGTAGTT GATATTCTTA GATTAGATGT TACGGTGGCA 
    AGAGTCTTGA TTGTGAGGCT TTTATTGGAT ATACGAAATA TCAATTGAGA 
    ATTTGCATAT TTGACTAGAG TTTCTAAATA AAAGGAAAGC AACCAAAATG 
    GAGAACTTTC GTCTTCAAGT TTGAAATGAT TAATGAATTT AATTTTGTCA 
    TTAAGATCGA AACTTTAGTG TGAACATGTA TACATACACA CCTAATCCTT 
    TATTTGGTAG TGATTATTTT GGAGAGTGCA TATATAAATT AGGTATACGT 
    CGCACATCAT TGAATGTTCG AAATTTTCCA AGACATAACA CTAATTCATT 
    TGAATAATAC ATTCTCTACG ATTTTTAGAC ATTTC

AT1G02380.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01960.1); Has 66 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G02390.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 2
Curator Summary
Encodes a member of a family of proteins with glycerol-3-phosphate acyltransferase activity.
Computational Description
glycerol-3-phosphate acyltransferase 2 (GPAT2); FUNCTIONS IN: acyltransferase activity; INVOLVED IN: metabolic process; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 3 (TAIR:AT4G01950.1); Has 367 Blast hits to 357 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 4; Fungi - 0; Plants - 361; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR