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ET14370

CSHL Arabidopsis genetrap mutant lines

Original: ET14370

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET14370

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 164864 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: ET14370 - 3-prime edge 
    AGATTTTGTC CTATATCTTT GAAACAATAT AAAAGTGTTA GCATGCAAAA 
    TTTGACCACA AAAAAGTTCC TATAAAAAGT GAAAAAATTT CAATATTATT 
    AAAGTCAAGA CTAGCTAAAT GCCACTCTAA TGTAATTAAA ATATTTTTGC 
    TTATTTACTT TGTACGAAAA AAACAAACAA ATGGAGGAGA AAAATATAAG 
    GAACTCACCA AACGGGATTT GACTCCTCTT GTGGCGGTGG TGGTGGCGGT 
    GGCGGTGGCC GTGGTGGCGG GCTCGTCCTG TCGTGTGTTC TGATATGCCT 
    CCTCTTGCCT CTGTTTGGCC ATAAAGAGAG CAGCGATCTT CTGCGTAGCT 
    TCGGCTTCGG TGGCTCCTTC TTTAACGAGC TTTTCAAGCT CAGCTTTGGG 
    AATCCTCACC TTCACCCTCC TCACCGCTCC TTCTTCTTCC TCCA

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 165034 [Map]; Strand: w
      • AT2G01340.1 - [+] show detail - At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal pro...
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: ET14370 - 5-prime edge 
    TTCATCCTAC TTTCTCCCTG TATTGATATG TTTAGTAATG ATGTTGCAGA 
    AACGAGTGAG TTTCATGGCG GAAACAGGAG GAGGGAGCGA GATCACTGTA 
    GCTTGAACCA ATAAACATAT GTATTAGAGA ATGCTTCCCA ACGTTTCTGC 
    AAATTCTATG TACATAAAAA ACGCAGAAAG TTTGAGAGAA AGCTTATTCA 
    GATATTCATC CATGTCTCCA CTCTATTGTA CTCAAGAGTT TTACTATTAT 
    TACATTGTAG AAGAAACAGT CATTTTATAG GCAGATTCAT TCGTTTGCCT 
    CTCACCTTAT TGATTACATG TTTCCCGGAA AATAAAAAGA AAGTAAGTAT 
    ACGAGGAAGA CGATGTTCTC TATGCTCGTT TGGTCCTT

AT2G01340.1

Model type
Protein coding
Curator Summary
Encodes a protein whose expression is responsive to nematode infection.
Computational Description
At17.1; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, response to nematode; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 110 Blast hits to 110 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR