ET3214

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

indehiscent silique (AGL8 == fruitfull)

Anatomical entity /structure development stage	Phenotypes
fruit (PO:0009001)	abnormal (PATO:0000460)

Original: ET3214

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24506237 [Map]; Strand: c
  - AT5G60910.1 - [+] show detail - AGAMOUS-like 8
    Distance: -94; Region: promoter
  - AT5G60910.2 - [+] show detail - AGAMOUS-like 8
    Distance: -921; Region: promoter
Flanking Genome Sequence: ET3214 - 3-prime edge
```
GGGTTTCGCG TGAGTCTACA GTGACGTAAG TGATGTGGTA TAAATACGGT 
ATGTGACGTG AATACAT
```

5 prime edge [+] show sequence

Chromosome: 5; Position: 24506036 [Map]; Strand: c
- AT5G60910.1 - [+] show detail - AGAMOUS-like 8
  Distance: 0; Region: exon1 (5UTR)
- AT5G60910.2 - [+] show detail - AGAMOUS-like 8
  Distance: -720; Region: promoter

TATTTTNNAA TCCATTTGGG CCCCNTGANT CCCTTTCAAA ANCAGGGTNC 
TCGGGGTCCC TCTCTTGTTC TTGAGATTTT GAAGAGAGAG AGATATGGGA 
AGAGGTAGGG TTCAGCTGAA GAGGATAGAG AACAAGATCA ATAGGCAAGT 
TACTTTCTCA AAGAGAAGGT CTGGTTTGCT CAAGAAAGCT CATGAGATCT 
CTGTTCTCTG CGATGCTGAG GTTGCTCTCA TCGTCTTCTC TTCCAAAGGC 
AAACTCTTCG AATATTCCAC CGACTCTTGG TAAATGTTTT TTAATGTTTT 
ATATTATATA TCACATCGAT CATATCTATC TGTTTTCTTG ATCTTTAACC 
AGATTTTGTT TTTTATTCGT ACTTCTCGAT CTCGATCGTC GTCAGCCTTG 
GAAATAAATC CAAATCTCGT ATCTTGGTCT TTCTTCTCTC TCGA

AT5G60910.1

Model type: Protein coding
Short Description: AGAMOUS-like 8
Curator Summary: MADS box gene negatively regulated by APETALA1
Computational Description: AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, MADS-box (InterPro:IPR002100), Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G60910.2

Model type: Protein coding
Short Description: AGAMOUS-like 8
Curator Summary: MADS box gene negatively regulated by APETALA1
Computational Description: AGAMOUS-like 8 (AGL8); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: positive regulation of flower development, maintenance of inflorescence meristem identity, fruit development; LOCATED IN: nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, K-box (InterPro:IPR002487); BEST Arabidopsis thaliana protein match is: K-box region and MADS-box transcription factor family protein (TAIR:AT1G69120.1); Has 3783 Blast hits to 3782 proteins in 618 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 10; Plants - 3766; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link: InterPro Scan - TAIR