ET43

CSHL Arabidopsis genetrap mutant lines

Original: ET43

Phenotypes

Morphological phenotypes

Original description

  • poor growth
Anatomical entity
/structure development stage		 Phenotypes
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)

Original: ET43

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25749744 [Map]; Strand: w
      • AT1G68570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: intron5 (CDS)
    Flanking Genome Sequence: ET43 - 3-prime edge 
    CGACCGTTTT CATCCCTACC TGACATTAAA GAAATGATTA AATAGTTAGT 
    TATTCGGTTA GAGAAGTCGT TAGTTAACAA AAGTTAGTTA GACTCTTTAA 
    CTAACTCTCT GTTTATATAA CAGAGTATGT ATAATGTTTT CATTACCTGA 
    TCGTAAAAAA ACTCAAAATG TCCGATGGAC ATGAAAGCTT CAGCGACTCC 
    ATGGAGACCA TATTGAGGAA TCAACCAAAG AAACGAGATT GGAACAATCG 
    TGTGAGGTTT ATCGAGGAGA CCGTGCTCAA TCGCGACGCT CTTTCGCTTT 
    ACTTCGACGA ATCCGGCAAC TAACGTGGCG ATTATCGAGA TTACGAATCC 
    GATTCCCATA CGGTGGAGGA ACGTGATGCC TCTTTCGAGA CCGGTGAATT 
    TGCGAGCGAC TTTGACGAAG ACGCGGTCGT AGAAGATGAT TGTGGTAAGC 
    ATAGCGACGG TTGTGAAGAC GGACATTGAA CCGGCTGGGA TTTGGAAGGA 
    GTTTGTTAGG TGACGGTTCA TGGTTTTGGC TTGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25749869 [Map]; Strand: w
      • AT1G68570.1 - [+] show detail - Major facilitator superfamily protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: ET43 - 5-prime edge 
    CACGGCAACG GCGCTTTTTT GGATGGCGAT TTCGATCGGA AACTATGTGA 
    GCACTTTGCT GGTGACTTTG GTTCATAAAT TCAGTGCTAA ACCGGATGGG 
    AGCAATTGGT TACCGGATAA CAATTTGAAC CGAGGGAGGC TTGAGTATTT 
    TTACTGGTTG ATTACTGTGT TACAAGCTGT TAATCTTGTG TATTATCTAT 
    GGTGCGCCAA GATTTATACG TATAAACCGG TTCAGGTTCA TCATAGCAAG 
    GAAGATAGTA GTCCGGTTAA GGAGGAATTG CAGTTGTCAA ATAGGAGTTT 
    AGTTGATGAA TGAGTCTTGG CGTTGGATGT GTAATGTAAA ATTACTAAAT 
    TAGTATAGTT GTAATATGTA CTTATCAATC CAATAAATTA GAAAGAATGA 
    CTTTGTCCAT TGTTGTGGGT GTTCAATATT GATAAACCCA CCTCACAATT 
    TTTTTATTTT TTTGATAAAC CTATATAATC CGATCGGAAT TAAATTAAAA 
    CAACATTCGT AAATTCCAAA CCAAATTTAC TTTGGGTTAA TACTAATA

AT1G68570.1

Model type
Protein coding
Short Description
Major facilitator superfamily protein
Computational Description
Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: peptide transporter 1 (TAIR:AT3G54140.1); Has 5938 Blast hits to 5565 proteins in 1029 species: Archae - 0; Bacteria - 2262; Metazoa - 736; Fungi - 385; Plants - 2206; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink).
Link
InterPro Scan - TAIR