ET6341

CSHL Arabidopsis genetrap mutant lines

Original: ET6341

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET6341

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26704141 [Map]; Strand: c
      • AT1G70810.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET6341 - 5-prime edge 
    CTCCATCTCA ACCTCTTCCT CTGTTTTCTC TGTTCTTTTC TTCTGAATGT 
    GTGATCGATT TCTCTAGGCG GCTCTGACTC TTTTACCTTC TTTTTTTTTA 
    ATTCTAAACA ATTACCGGCT CAAATTCAAC GAGGACCACT TAAAAATTGG 
    CTTATCAATG GACGATAGAG CGAATAAAAA AACAAAAAAT AAAAACCATC 
    TATATAATAG GTTTCGTTTA CCAGGTGTTT GTTTCTATAT TATTCTCATC 
    TACGCGTTAC TCTCACGAAC ATCTTTGGTA ATAATATCTT CTTGATTCTT 
    CTTTTTTTCT GACTATGGAC AAAAGGTTTA AGCCGTTGAC TTTTCCAAAA 
    ACATGTTTAC CAAACCAATA TAAAACATAA ATATCACTTT TTCTTTTTTG 
    TGATGAAAAG AAAACTCGCG GGAAACCAAA ACGGTTTCGG TTAAATCTAA 
    AACCAAATAT ATTTCCATTA CAAAACAGAG TACTANTACT CTGTTCTATT 
    TTATTAACTG AGATTTTTTT TATTACACAC AGAAAATCAT AAAGCTACTT 
    CATCTC

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26704142 [Map]; Strand: c
      • AT1G70810.1 - [+] show detail - Calcium-dependent lipid-binding (CaLB domain) family protein
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: ET6341 - 5-prime edge 
    CCTCCATCTC AACCTCTTCC TCTGTTTTCT CTGTTCTTTT CTTCTGAATG 
    TGTGATCGAT TTCTCTAGGC GGCTCTGACT CTTTTACCTT CTTTTTTTTT 
    AATTCTAAAC AATTACCGGC TCAAATTCAA CGAGGACCAC TTAAAAATTG 
    GCTTATCAAT GGACGATTGA GCGATTAAAA AAACAAAAAA TAAAAACCAT 
    CTATATAATA GGTTTCGTTT TCCAGGTGTT TGTTTCTATA TTATTCTCAT 
    CTACGCGTTA CTCTCACGAA CATCTTTGGT AATAATATCT TCTTGATTCT 
    TCTTTTTTTC TGACTATGGA CAAAAGGTTT AAGCCGTTGA CTTTTCCAAG 
    AACATGTTTA CCAAACCAAT ATAAAACATA AATTTCACTT TTTCTTTTTT 
    GTGATGAAGA GAAAACTCGC GGGAAACCAA AACGGTTTCG GTTAAATCTA 
    AAACCAAATA TATTTCCATT ACAAA

AT1G70810.1

Model type
Protein coding
Short Description
Calcium-dependent lipid-binding (CaLB domain) family protein
Computational Description
Calcium-dependent lipid-binding (CaLB domain) family protein; CONTAINS InterPro DOMAIN/s: C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: Calcium-dependent lipid-binding (CaLB domain) family protein (TAIR:AT1G70800.1); Has 2955 Blast hits to 2573 proteins in 230 species: Archae - 0; Bacteria - 3; Metazoa - 1505; Fungi - 422; Plants - 763; Viruses - 0; Other Eukaryotes - 262 (source: NCBI BLink).
Link
InterPro Scan - TAIR