ET7536

CSHL Arabidopsis genetrap mutant lines

Original: ET7536

Phenotypes

Morphological phenotypes

Original description

  • yellow seedlings
Anatomical entity
/structure development stage		 Phenotypes
seedling (PO:0008037)
  • yellow (PATO:0000324)

Original: ET7536

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25823297 [Map]; Strand: c
      • AT5G64590.1 - [+] show detail - BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl...
        Distance: -96; Region: promoter
    Flanking Genome Sequence: ET7536 - 3-prime edge 
    AAACGGTAGA GGATTTTACC GACCGTTACC GACCGTTTTC ATCCCTACTC 
    GGTAGCGGTG TCAAGTGGGC CACAAACCTA CGGGCTTGGC CCAATAAATG 
    GGTTGTTGAT GTCTGCAAAT CTTAGTAAAA CGGTAATATT CCGAGTATGA 
    TGTCTAGGGA AGACAAATTT CAAATCCATG AACAGAATCT AATCCAAATA 
    AATTTAGCCA TCTTAAATCT TAATCATACT ACGTATATTG TTCCTAATAT 
    ATGTAAATCT CCAAAGACGT AAAAAAAGAT AAGGAACTTA CCGGGGTCAA 
    CATATTGTAA TATAAAACCG TATATTTATC TAAATACTTA GTCTTTTATA 
    TAACATATCA CATTTAAACA AAATTTCCAA ATACAGATTT TTAAATGATA 
    TTTTTATCAT CATTTAAATT AAAAATATTT GGTTAATTTA TAGACATAAT 
    AAATGCGCAT GAAGAAAAAG AAAAAAAAAG GAAAATTATT TGATTTACCG 
    GTTTTGCCCA GGGATTAATT ATTCCTAAAA CCTTAAAAGG AGTTCTAAAA 
    AAAGGTCCAA ACTGGAACAA GGGGG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 251899 [Map]; Strand: c
      • AT2G01560.1 - [+] show detail - Plant protein 1589 of unknown function
        Distance: -93; Region: promoter
    Flanking Genome Sequence: ET7536 - 5-prime edge 
    CACATTTTTG TCTCTCTATA TTTTCTTCGT TAAACCTCTT TGACTAACTA 
    TCTTATCAGA ATCTCTCTTT CCTTCACAAA GATAGGATCT TTCTTCAAAC 
    TTCAGAAAAA GATCGCAGAG AAATTTCTTG ATCTGTGAAA TCAGAAGAAA 
    ACGTTTTTCT GAAAATGAGT CCGCATGTAT TAGATCTTCC TAAGGAGTGC 
    GAAATCTCTA ACGATCT

AT2G01560.1

Model type
Protein coding
Short Description
Plant protein 1589 of unknown function
Computational Description
Plant protein 1589 of unknown function; CONTAINS InterPro DOMAIN/s: Conserved hypothetical protein CHP01589, plant (InterPro:IPR006476); Has 88 Blast hits to 88 proteins in 31 species: Archae - 0; Bacteria - 9; Metazoa - 4; Fungi - 11; Plants - 55; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64590.1

Model type
Protein coding
Computational Description
BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62200.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR