ET7585

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

semi-sterile

Anatomical entity /structure development stage	Phenotypes
seed (PO:0009010)	present in fewer numbers in organism (PATO:0001997)

Original: ET7585

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 4; Position: 743082 [Map]; Strand: c
- AT4G01710.1 - [+] show detail - ARP2/3 complex 16 kDa subunit (p16-Arc)
  Distance: 6478; Region: intergenic
- AT4G01720.1 - [+] show detail - WRKY family transcription factor
  Distance: -1839; Region: intergenic

TTTTACCGAC CGTTACCGCC CGTTTTCATC CCTATCCTTA GCTAAAATGT 
TGATCTAACT AAAGAGATTT ATATGTCAAT TTCCAACCAA AAGATTTAGG 
CCCTGAATGG GTGCTGATTT TCGATTCAGT TTTTGGATTT TGATTTTAGT 
TTCTAGATTT TAGATTTTAG TTTTAGATTT TTGTTAATAT ATTTTTGTTT 
TAAAAACTCC AAAAAATTAG TTTTTAGTTT TTGAGAAAAA TAACGTTGAT 
GGAGTAAAAA CTAAATTCCC TAAATTTTAG GAAAACTAAA AAACTAAAAT 
CATGAATGGA AAATTACAAC AAAATAGTTT TTCAAATTGT GAGGGAAACC 
AAAATTTTAA AATCTTGATT GGTATGAAAA TAAGTTTTTG AAAAACAAAA 
TCCAAAAACT CTTACAAAAT CTACAAAACA TTCAAGACCT TATT

5 prime edge [+] show sequence

Chromosome: 4; Position: 742977 [Map]; Strand: c
- AT4G01710.1 - [+] show detail - ARP2/3 complex 16 kDa subunit (p16-Arc)
  Distance: 6373; Region: intergenic
- AT4G01720.1 - [+] show detail - WRKY family transcription factor
  Distance: -1944; Region: intergenic

TTGGACCATC CTAAAGGCTA CTATATTTAT TGGCGCTGAA ATTTTGCTCC 
TTGATTGTTT ATTCTGGAGA AAACTTTTTT CTTAGAGCAT TAATACAACA 
AGACTCACTA AAAATACAAT AACTTTTGGT AAAATTAAAT CGAGGTCTTA 
TAATTTATAA CTGAGATGGT TGGTTAATTG TGTAAAGCAC GTAGTTGTAG 
AAGAATGTTG TTATTTCTTT CGTTCCAAAC ATGAAACATG CATAAGTTAG 
TGAAGTAGAG AGGGTCAAAC GTGCTATCGG TGAGATATGA GATCGTATCC 
ATCCAGTTCA GAGAAAGGTG CTAGCAAAAA AGAAACGTAT CTACAAAATT 
ATATGTCAAA GAACATAAAA AGAAATTTCA TTTGTTTTTC GGGCTATTAT 
CGAAAGGACT TCCTCTNTGC TTTTCGCCTT TCACATTTTT TTTCTTATTT 
ATTTTTAT

AT4G01710.1

Model type: Protein coding
Short Description: ARP2/3 complex 16 kDa subunit (p16-Arc)
Curator Summary: belongs to the DIS(distorted) gene family. Encodes a actin polymerization factor. Involved in cell expansion of trichome.
Computational Description: CROOKED (CRK); CONTAINS InterPro DOMAIN/s: ARP2/3 complex 16kDa subunit (p16-Arc) (InterPro:IPR006789); BEST Arabidopsis thaliana protein match is: ARP2/3 complex 16 kDa subunit (p16-Arc) (TAIR:AT5G65274.1); Has 360 Blast hits to 360 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 256; Fungi - 50; Plants - 40; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G01720.1

Model type: Protein coding
Short Description: WRKY family transcription factor
Curator Summary: member of WRKY Transcription Factor; Group II-b
Computational Description: WRKY47; CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657); BEST Arabidopsis thaliana protein match is: WRKY family transcription factor (TAIR:AT4G04450.1); Has 3605 Blast hits to 3148 proteins in 215 species: Archae - 2; Bacteria - 4; Metazoa - 47; Fungi - 10; Plants - 3482; Viruses - 0; Other Eukaryotes - 60 (source: NCBI BLink).
Link: InterPro Scan - TAIR