ET7641

CSHL Arabidopsis genetrap mutant lines

Original: ET7641

Phenotypes

Morphological phenotypes

Original description

  • small plant with elongated petioles
Anatomical entity
/structure development stage		 Phenotypes
rosette leaf (PO:0000014)
  • increased length (PATO:0000573)
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: ET7641

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2344438 [Map]; Strand: w
      • AT4G04632.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -4389; Region: intergenic
      • AT4G04635.1 - [+] show detail - transposable element gene
        Distance: -3465; Region: intergenic
    Flanking Genome Sequence: ET7641 - 3-prime edge 
    TATTTTACCG ACCGTTACCG ACCGTTTTCA TCCCTATGTC ACACAATCAT 
    ATCATCAATA AACATGCATT CATTTTCTGT TACCATTTTA ATACTAGTTC 
    GGTTGGTACA TAGTTATATA CATATCCACA TATAAAGAAG TTAGGGCTGG 
    AGCCTGAGTT GGTGTTGATG TCCTAGAGTA GCGAAACTAC AAGTGAAGGG 
    GCGCTCGAAA TAGCTTTATT TGCTCCGTTC CCTTCTTTAT CGAATAGGGG 
    TTCTTCAAGT AAAGGGCTAA CTCTTAACTA GGCTAGCGAA GGAACTGACA 
    TTAGGGAAAG AACTCGACTC TCGGGGAAAA ACTAGGAAAC AACCAACAGT 
    GTCAAGGTCT TCCGCCTAAA ACTACAACAA GTGGAAGAGG CAGGATTCGA 
    ACCTACGTAA GAGCGCTGGC CCTTGTCATG GTGAGTTTGG TTGCTTCCAT 
    TTCCATTCAA GAGTTCTTAT GTGTTTCCAC GCCCCTGATT TCGACATTGT 
    TGTTTCACTC TGATCCGGTC GTGGTGGTTT TGATAAAAAT CGCCAGTATA 
    CAAAATGAAA A

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 2344550 [Map]; Strand: w
      • AT4G04632.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -4501; Region: intergenic
      • AT4G04635.1 - [+] show detail - transposable element gene
        Distance: -3353; Region: intergenic
    Flanking Genome Sequence: ET7641 - 5-prime edge 
    AGGTTCCTAG CAATAAAAGT CTCAACATTC TGAAACAGTC TCTACGACCA 
    AACCATGGAA TGAACCAGTC TGAGTACTCA ACGTTCTTC

AT4G04632.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G45670.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G04635.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G43722.1); similar to Zinc transporter, putative [Asparagus officinalis] (GB:ABB55331.1); contains InterPro domain Transposase, IS4; (InterPro:IPR002559)
Link
InterPro Scan - TAIR