ET8213

CSHL Arabidopsis genetrap mutant lines

Original: ET8213

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8213

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25883101 [Map]; Strand: w
      • AT1G68845.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: 183; Region: intergenic
      • AT1G68850.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 515; Region: intergenic
    Flanking Genome Sequence: ET8213 - 3-prime edge 
    TNTACCGACC GTTACCGACC GTTTTCATCC CTATTCACCC ATGTCACCAA 
    ACGATTAATA TAAGAATCCG GGAAGTGAGT AAAACCGAAC TCATTCATCA 
    CACCTCTAAT AACCCTCACT AGATAATCGA CGCTTTCATC TCACT

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25883233 [Map]; Strand: w
      • AT1G68845.1 - [+] show detail - unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bac...
        Distance: 315; Region: intergenic
      • AT1G68850.1 - [+] show detail - Peroxidase superfamily protein
        Distance: 383; Region: intergenic
    Flanking Genome Sequence: ET8213 - 5-prime edge 
    TCCTGATAAC AAATGTGTGG CAGTGCTTGG CCCTGACATG GATTTGTTTG 
    GCACATGTTG TATATGTCAA GAAGATTTCT TTCTTGGGAT GGAAGCAACC 
    GTTACTTCTT CTTCATCTCT CTCGACCAAN ACTNNNTGCN TTGAAGACTG 
    GATGCAACAA TCTCAAAATT GTCCACTTTG TCGTATCCTC CTTCCAGTAT 
    CAAGTACGTG AGATCGAGTC TTGACGTCTT TAGCCTGTTT CCATGCTAAA 
    TTCTTAGAAA CTCTATCTTT TACATGAGCA GAATTTTGCT TTGCTTGTCT 
    CTTTATCAAC CTTAAATTTC AATATACATT TTTTGAAAAG AATTATTTCT 
    TCTTTCGAAC TTACAATATT GGAGTTTGAG TTTTTGCATA TATAGTGCAA 
    TTATTTTATT GATTTTGTTG CATGCACAAC CATAAATATA AAGTCAAACC 
    AAAAAAACAA CTACAGACTC AGATCAATTG AAAATCATTA G

AT1G68845.1

Model type
Protein coding
Computational Description
unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G68850.1

Model type
Protein coding
Short Description
Peroxidase superfamily protein
Computational Description
Peroxidase superfamily protein; FUNCTIONS IN: peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: Peroxidase superfamily protein (TAIR:AT4G36430.1); Has 4434 Blast hits to 4410 proteins in 271 species: Archae - 0; Bacteria - 4; Metazoa - 19; Fungi - 149; Plants - 4210; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).
Link
InterPro Scan - TAIR