ET8356

CSHL Arabidopsis genetrap mutant lines

Original: ET8356

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
  • dwarf mutant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: ET8356

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3426554 [Map]; Strand: w
      • AT4G06549.1 - [+] show detail - transposable element gene
        Distance: -217; Region: promoter
    Flanking Genome Sequence: ET8356 - 5-prime edge 
    ATATGTTGCC CAATTCTCAT TAAGTTACAT TCATAAAAAA GGCTTACATA 
    CACAAAGGAG TAAACCCTAA AACTACCTTA ACGGCAAACA ATTGTTGTCT 
    TCAACAACAA AAACCCAAGT AATTAAACAC ACAAATAAAT TTGGAATAAC 
    TTGGATTCCC GAAATACAAT TCCTCGAATC CGAGTTTATG AGATGCATTC 
    CTATCAATAA AACTATTGAT TAGTCTAAAA GACAAAATAG TACTATTCAT 
    ACCTCCGACT GCCTGCCCGG ATATAAGAGC AACCAAGTTT CTTGATGGAG 
    CCCTTCGCTG CGACCAATTG GGACTGCAAT TCGGTGGTTG TAGGGAAGAG 
    GACACAAATA TAAACAACTA TGGTCCCTTC TATCAACCCA AACTGATGTA 
    ATCTCTATCT AATTAGCAAA CCCCAAATGA AAAAGAGCAA ACCCTACATA 
    TGGTACTGTC AAC

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 3426617 [Map]; Strand: w
      • AT4G06549.1 - [+] show detail - transposable element gene
        Distance: -280; Region: promoter
    Flanking Genome Sequence: ET8356 - 5-prime edge 
    AACCCTAAAA CTACCTTAAC GGCAAACAAT TGTTGTCTTC AACAACAAAA 
    ACCCAAGTAA TTAAACACAC AAATAATTTT GGAATAACTT GGATTCCCGA 
    AATACAATTC CTCGAATCCG AGTTTATGAG ATGCAGGGCT ATCAATAAAA 
    CTATTGATTA GTCTAAAAGA CAAAATAGTA CTATTCAT

AT4G06549.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
pseudogene, hypothetical protein, temporary gene name assignment
Link
InterPro Scan - TAIR