ET8590

CSHL Arabidopsis genetrap mutant lines

Original: ET8590

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: ET8590

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: ET8590 - 3-prime edge 
    CCGTCTCTCT CCATNCCCCC TNACTNGCTN ACCAANAGTG GTGGTCTGCT 
    CTCAGCNAGG NAATTAACCG CAGAGCTGAG CTCAAAAAGT AAAGGCAAGC 
    CCTCCNGCCG NAGCTCTCTA CTCCANANAG GGCCGTACTC TCCACTCCNT 
    CCAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10854668 [Map]; Strand: w
      • AT2G25500.1 - [+] show detail - Inosine triphosphate pyrophosphatase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET8590 - 3-prime edge 
    GTAGAGGTTT TTACCGACCG TTACCGACCG TTTTCATCCC TACTGTACAA 
    AGGTGTTATT AGAGAATAAC CAACTAGTAA AGAAGAAGCT CGCGAGTTTA 
    TCAAAGGCTA TTCGGGTCAC ACGGTGGCGT TGTGCAATCT GTTTTTGTGA 
    GAAACTTGAA AACTGGAGTT GGAAGAATAG GATGGGACAA AGCAGAGGTT 
    TATTTCCATG AGATACCAGA ACATGTCATC GATGATCTTA TTGATGATGC 
    AATAACTTTC AAGGTTGCTG GAGGTTTGAT GCTTGAGCAT CCCCTTATTT 
    CACCTTTTAT TGATTCCGTG GTGGGAGGTG TTGATACAGT CATGGGACTT 
    TCTAAAGAAC TCACTGAAAA ATTCATTAAC GATGTGTTGT AGGCTTGTAG 
    CTCAAGTACA TTTTCTCAAA AGGTACATGA CCACTCTGCA AAAAATGATT 
    TGTTAAAGTG TACAATGTCT TGAGAAACCG TGGACGACTA CATTTTTTAA 
    AGAAAAAGT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10854804 [Map]; Strand: w
      • AT2G25500.1 - [+] show detail - Inosine triphosphate pyrophosphatase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET8590 - 5-prime edge 
    GTTTTCACCT CCTAATTTCA ATATAATCTC ATTTGCTTTT GCTTCAGCCA 
    AATCTTCAGG CTTCTCTTTC CTAATAGCTT TCTCATCAAT ATCTGCAGTT 
    ACAATAGTGA AATCATATCC CATTTCAGCC AGAATCTGCT TTCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 10854722 [Map]; Strand: w
      • AT2G25500.1 - [+] show detail - Inosine triphosphate pyrophosphatase family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: ET8590 - 5-prime edge 
    CCTACTTTCT CTCTGTCGAC TAGTACACAA CAACAGTATC TGCAGTAATC 
    AATAGAGTTG GTTGAGAATC TTGTGTAAAC TGGTTTTCAC CTCCTAATTT 
    CAATATAATC TCATTTGCTT TTGCTTCAGC CAAATCTTCA GGCTTCTCTT 
    TCCTAATAGC TTTCTCATCA ATATCTGCAG TTACAATAGT GAAATCATAT 
    CCCATTTCAG CCAGAATCTG CTTTCTCGCC ATCGACTGAG AACCTAGAAT 
    CAGCTTATAT CCGTTCTCCA TCGCCTTC

AT2G25500.1

Model type
Protein coding
Short Description
Inosine triphosphate pyrophosphatase family protein
Computational Description
Inosine triphosphate pyrophosphatase family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR