F08142

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F08142

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F08142

Determination of introduced cDNA(s)

  • RAFL09-49-F14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-49-F14 - Resource: pda06417

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-49-F14 - full reading 
    GAAGGGAAAA AACCAAAAAA ATATATCTTA CAAACAAAAT AAGGGTGCAA 
    AACGTATAAG AAAATAAAAG AATGGGATCA AAGTGGAATA AAAGAATATT 
    AGGGCGTCGG TGACGTGAAG CTTCGCTGCT GGGAGAAAAA AGCTCACATG 
    CGTATTATCT CAGTCTCAGC TATATTTAGA ACAACAACAC ATGTCTGAAC 
    ACATTACAGT TCCTATATCT GTTTCGAATT CAAATCTCCT GTCCTTTTTT 
    CATATATAAT AATTCATCAT AAATATTTAT TGATTTGATT CTATCTCTTA 
    TATATATTTT CGATCTCTCC TGAAAAGAGA AAAAAGTTGG AAACTTCGAC 
    GAATGTGTTT ATAAATCTTT TTATTTTCTA TCTGTCTTGA TTTAGTTTTA 
    TCTTTTTTGG AATCGGTCTG AAGTTGGACA AAAGAATCCG CCATTTTCTC 
    CTCGGTCTCT CTGCTCTTCT CTTCAGTATC GGATCTGGGT CTCCTTCGCT 
    TTCGTTTCAA GATTATTTTG GGAGACGAGG AGGCGTTAGC TGTAATTCAT 
    TGTATACTTG CTTTGGCTAT TAAAGCCGTC ACACAAAAAA AGTAAAAGCA 
    ACACACACAC ATAAATAGAC ACACTTTTTT ACGTATATGT GTGTCTTCTT 
    TCGTCTCTGT TGGGAATAGA TCTTGTCCTA AGAGATCACT TCGAGTCTGA 
    TCTAAAGTGA GAAACTTTGG TTCTTGTTTT GGTTTTTGGA ATCTTGTCTA 
    ATCTGGGGAG ATAATGGGAA TGAGTCTCGA TTTCGATGTT GATCTTGAGA 
    AAGGAATCAT AGATTGCGAC AATGTTTATA CAAAATCACC GGAGAAGCCG 
    ATGTCTCCTG ATAACAAACC GGTAATAACC GGAGAAGAAA GTGTTGGTTC 
    GTTAGAGAAT GATACAAGTC CGGTTCAATG TGGAATCAAT AAACCGGGAT 
    GGGGGAGAAG CGATCGGAAG GAGAAACGGA AGAAATCTGC GTCGAAGCCT 
    CCTCGACCGC CGCGTGGACC GTCGCTAGAC GCGGCGGATC AGAAACTTAT 
    TAGAGAGATC GCTGAATTGG CGATGTTGAA ACGCGCGAGA ATCGAACGTA 
    TGAGAGCTTT GAAGAAATCA AGAGCGGCTA AAGCTGCGTC TGCCGCTTCT 
    TCTTTAGGCA ATGTATTGGC CACTCTTTTC ACCGCTATTT TCTTCTTTGT 
    CCTCGTTTTC CAAGGATTGT CACCGAGAGC AGCCGGTAGC TCCGGGAAAT 
    CTCACTTAGT AGTCGCCGGC AAAGCCAATG GTGGTTTTGT TTCGGTTCAA 
    TATGCGGGAA ATCCGTCGGC GAGCGAACCG GATGGAGGTT ATACCGGACC 
    AGTTTTAGCA CAGAGACCAA ATTTACTAAA ACCGGTGTCC GGTTTGGAGA 
    ATGAAAAGAA GAGTTCACAG TGAAAGCGTA ACGAAATGGT TAAGAATTGG 
    ACAGTTCCAT ACTGGTTTGC TCAAACCATT TATCGGTTTA GATTGTCGGT 
    GAGACATGTA CCGATAAACT TTTTGGGAAA ATCGGCTGCT TTCTCTGCGG 
    CTGTGAAACG ATAATATTAT CCGATGTGGG TAAGAAAGTA GTTTTGTGTC 
    AGTTTTTTCT TGAATAAACT GAGAGAAGTT TACAAATAAT AAAAATCAGT 
    GTTATATTAT CC

    Gene models with high sequence identity

    1. AT3G17120.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G17120.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02380.1); Has 67 Blast hits to 67 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR