F08427

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F08427

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F08427

Determination of introduced cDNA(s)

  • RAFL06-83-D05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-83-D05 - Resource: pda03846

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-83-D05 - full reading 
    GGTTTCAGTT CAGAGTAAGA GAGACAGAGA GAGAGATGAG TAGCTTCACG 
    ATTCCATCTC CTTCCTCCTT CTCTCTTTCC AATTCATATA ATCAAACCTC 
    TCCTCATTCC TTCACTCTCC GCAATTCTCG TTCCAATTTT GAGTTCCACC 
    GGTTACGATT AGATGTGGAG TCTCGAAGAA GAAGCACTTC TTTACGGTCC 
    AATTGCTCCA CCAAAGGTAC AGATTCAGGT GAAAATGAGA ACAAAAGTGT 
    GTTAGATGCT TTCTTTTTGG GGAAAGCATT AGCTGAGGTT ATCAATGAGA 
    GAATTGAGTC TACTGTTGGA GAAGTGTTGA GTACTATTGG AAAGTTTCAA 
    GCTGAGCAAC AGAAACAAGT TCAAGAGATT CAGGAAGAGG TTCTTGAAAG 
    AGCTAAGAAA GCTAAGGAAA GAGCAGCTCG AGAAACTATG GAGGAACAAG 
    GACTTGTTGC TTCCAAACCA GTAGCCATTA CTCGAAATCC GGATGCTGTT 
    GTTGTTGCCT CTGTAACTTC TACATCGACC GTTGAGAGCA AGACTATAAT 
    GGTTGATGTA GAGGAAAGCT CGAGTTCCAG TGATGAAGAC TGAACGATGG 
    TTTCAAGGGT TTAAGTTGAA GATTTGGTAA TAGCAGCAGA GACTTGTCTA 
    AAAGGGTTAA GATATATGTA CTTGAAAAAA CGATGTAAAC AATGTAAGTT 
    GATATAAATC AAGGTTAAAC CAGCGAAAAA AAAAAAAAAA A

    Gene models with high sequence identity

    1. AT4G13200.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G13200.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR