F10846

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F10846

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F10846

Determination of introduced cDNA(s)

RAFL05-17-D15 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-17-D15 - Resource: pda07378

full reading [+] show sequence

GGATTACTCA CCTACTCGAG AGTGGTTTAG CTTTTTTGTA CCGTACATCT 
TCTTCCCAGA AACATGGCTG AGGCTTCTGA TTTGTTGGAA TGGCCTAAGA 
AGGATAACCG TCGTTTTCTC CATGTTGTCT ACCGCGTTGG TGATCTTGAT 
CGCACCATTG AGTTTTACAC TGAGGTCTTT GGTATGAAGC TGTTGAGGAA 
AAGAGATATC CCTGAGGAGA AGTATTCTAA TGCTTTTCTT GGTTTTGGAC 
CTGAAACATC TAACTTTGTT GTGGAGCTCA CATATAACTA TGGTGTTAGC 
TCATATGATA TTGGAACTGG CTTTGGGCAT TTTGCCATTT CAACTCAAGA 
TGTTTCCAAA CTGGTTGAGA ACGTCCGTGC CAAGGGTGGA AATGTGACTA 
GGGAACCTGG TCCAGTCAAA GGTGGAGGCA GTGTCATTGC GTTTGTGAAG 
GACCCTGATG GCTACACTTT TGAGCTCATC CAGAGAGGTC CAACTCCTGA 
ACCTTTCTGC CAAGTCATGC TTCGTGTTGG TGATCTCGAC CGTGCCATCA 
AATTCTATGA AAAGGCCCTC GGGATGAGAC TCTTGAGAAA GATTGAGAGA 
CCTGAGTACA AGTACACCAT AGGCATGATG GGGTATGCTG AAGAATACGA 
GTCGATAGTT TTGGAGCTGA CCTATAACTA CGACGTGACT GAGTACACAA 
AGGGCAATGC ATATGCACAG ATTGCAATAG GCACAGATGA TGTGTACAAA 
AGCGGTGAAG TTATTAAGAT AGTCAACCAA GAGCTAGGAG GAAAGATCAC 
TAGAGAAGCC GGACCTCTTC CTGGACTCGG CACCAAGATT GTCTCATTCC 
TTGATCCAGA TGGCTGGAAA ACGGTTTTGG TGGACAACAA AGATTTTCTC 
AAGGAACTGG AATGAGAAGA GCGATGAATG AAGGTCGAGA TCACAAAACC 
ATAATAATAA AAATGTGATC ATAAAATAAA AGGAAGACTT AGAGTTTGAT 
CTAAAATAAG AAGATGTGGT TTAGTTTGTG TCGTGCTATG TGTGTGTGCT 
CGTTTCTTTT GTCTTTGAGC TTAAAAGTTA AAACTCTAGT CTATATGGAC 
CTGAATAAAA ATATTTCCAC C

Gene models with high sequence identity

AT1G11840.2 [+] show detail - glyoxalase I homolog
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Glyoxalase I, conserved site	0
PatternScan	Glyoxalase I, conserved site	0
PatternScan	Glyoxalase I, conserved site	0
HMMPanther	LACTOYLGLUTATHIONE LYASE (GLYOXALASE I)	6.9e-91
HMMTigr	Glyoxalase I	1.4e-96
HMMTigr	Glyoxalase I	9.8e-39
superfamily	Glyoxalase/Bleomycin resistance protein/Dihyd	6e-44
Gene3D	no description	1.8e-42
Gene3D	no description	2.6e-33
HMMPfam	Glyoxalase/bleomycin resistance protein/dioxygenase	9.6e-24
HMMPfam	Glyoxalase/bleomycin resistance protein/dioxygenase	2.9e-11

See the detailed result >

AT1G11840.2

Model type: Protein coding
Short Description: glyoxalase I homolog
Curator Summary: Encodes a glyoxalase I homolog ATGLX1.
Computational Description: glyoxalase I homolog (GLX1); FUNCTIONS IN: lactoylglutathione lyase activity, metal ion binding; INVOLVED IN: response to cadmium ion, carbohydrate metabolic process; LOCATED IN: peroxisome, plasma membrane, vacuole, chloroplast envelope; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyoxalase I (InterPro:IPR004361), Glyoxalase I, conserved site (InterPro:IPR018146), Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); BEST Arabidopsis thaliana protein match is: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein (TAIR:AT1G67280.1); Has 8678 Blast hits to 5178 proteins in 1682 species: Archae - 141; Bacteria - 5669; Metazoa - 503; Fungi - 263; Plants - 249; Viruses - 0; Other Eukaryotes - 1853 (source: NCBI BLink).
Link: InterPro Scan - TAIR