F11046

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F11046

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F11046

Determination of introduced cDNA(s)

  • RAFL14-16-I02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL14-16-I02 - Resource: pda18276

    full reading [+] show sequence

    Nucleotide sequence: RAFL14-16-I02 - full reading 
    ATTCACTGAT TATCGTTTAA GGCAAATTAA GATCATCTTC ATAAATCTTC 
    TCAGATCTCT TCCAATTTTC TAGAAAAAAC ATGTCTTGCT GTGGTGGAAG 
    CTGTGGTTGT GGATCTGCCT GCAAGTGCGG CAATGGTTGC GGAGGTTGCA 
    AAAGGTACCC TGACTTGGAG AACACCGCCA CCGAGACTCT TGTCCTCGGT 
    GTTGCTCCGG CGATGAACTC TCAGTACGAG GCTTCCGGCG AGACTTTCGT 
    TGCCGAGAAT GATGCTTGCA AATGCGGATC TGACTGCAAG TGCAACCCTT 
    GTACCTGCAA ATGAAGAACT TCATAAACCC TAAGTCTGTA ATAACCCTAA 
    TGTTATGTTA GGTTTGCTTA TATGTAATAA TTGGCTGATT TTTCCGGTAG 
    TTTTGCCGGC GACGTTGGTC TTTCTCTTCT TCTGTGTGTG TTTTTATGGT 
    TTGGTCATTA AGATATCTCT GCAAAGTTTT ATCTTTGTGA CTTTATTAAT 
    CCTAAGACTA TTATGGGTTT GTATTAAAGT TTGCTTCTTT CTTGCTCACT 
    ACACAATTAA GATTCAAGCC CATTGTCTCT CTGGTTATAA AGCAAAAAAA 
    AAA

    Gene models with high sequence identity

    1. AT5G02380.1 [+] show detail - metallothionein 2B
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G02380.1

    Model type
    Protein coding
    Short Description
    metallothionein 2B
    Curator Summary
    cysteine-rich protein with copper-binding activity
    Computational Description
    metallothionein 2B (MT2B); CONTAINS InterPro DOMAIN/s: Plant metallothionein, family 15 (InterPro:IPR000347); BEST Arabidopsis thaliana protein match is: metallothionein 2A (TAIR:AT3G09390.1); Has 601 Blast hits to 601 proteins in 129 species: Archae - 0; Bacteria - 0; Metazoa - 21; Fungi - 0; Plants - 576; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR