F13427

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F13427

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F13427

Determination of introduced cDNA(s)

  • RAFL05-08-F21 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-08-F21 - Resource: pda01093

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-08-F21 - full reading 
    AAATCCCGAT TCCGAGAGAG AGAGAGCGAT AGCGGAAGAC GATGGCTTTG 
    ACGGTGGCGA AGAGTGCGTT GGAGGCGATT AGAGAGAAAG GTCTCGGCGG 
    TTTCATGAGG ATGATCCGAG AAGAAGGCTT CATGAGATGC CTACCAGATG 
    GGAACCTCTT GCAAACTAAA ATACATAACA TAGGAGCGAC ACTTGTTGGT 
    GTTGACAAGT TCGGTAACAA ATACTACCAG AAGCTAGGCG ATACTCAATA 
    CGGTAGGCAC AGATGGGTAG AGTATGCTTC AAAGGATCGT TACAACGCAT 
    CTCAAGTACC AGCTGAATGG CACGGGTGGC TTCATTTCAT CACTGATCAC 
    ACTGGCGATG AGCTCTTGAG TTTGAAACCA AAAAGGTATG GGCTTGAGCA 
    TAAAGAGAAC TTCTCTGGAG AAGGTGATGC ATACATCTAC CATTCGAAGG 
    GACATACCTT GAACCCGGGA CAAAAGAACT GGACTCGGTA CCAATCATGG 
    GTACCCACCA AGACTCAGTA AGAAGATGAT ATTTTGGTTT TACGCTCTGC 
    GAGACTTTCT CTCGAGTGAT TTGTTGTTTT GTTTCTGTGT CATTTTAATA 
    AAAGCTGTCT TGGATCTAAA GCTGGACAAT TGGGTTTCGG ATCTGGAATT 
    GTAATTGTTA CTGTGTAATA ATTTGCTGAT TATTAAGTTT CTTGTTTCTT 
    CAAATAAAAA AAAAAAAAAA

    Gene models with high sequence identity

    1. AT3G03100.1 [+] show detail - NADH:ubiquinone oxidoreductase, 17.2kDa subunit
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam NADH:ubiquinone oxidoreductase, 17.2kDa subunit 2.9e-29
    HMMPanther NADH:ubiquinone oxidoreductase, 17.2kDa subunit 6.8e-38

    See the detailed result >

    AT3G03100.1

    Model type
    Protein coding
    Short Description
    NADH:ubiquinone oxidoreductase, 17.2kDa subunit
    Computational Description
    NADH:ubiquinone oxidoreductase, 17.2kDa subunit; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, 17.2kDa subunit (InterPro:IPR007763); Has 1526 Blast hits to 1526 proteins in 350 species: Archae - 0; Bacteria - 415; Metazoa - 153; Fungi - 83; Plants - 51; Viruses - 0; Other Eukaryotes - 824 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR