F14829

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F14829

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F14829

Determination of introduced cDNA(s)

  • RAFL09-43-D14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-43-D14 - Resource: pda08368

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-43-D14 - full reading 
    GGAAAAAATC TCTCTTTCGA ATAAAAAAAA AAATCTCAGA ATCCAAAAAT 
    GGGTCGTGTC CGAAAATCAG ATTTCGGTTC CATTGTTCTT GTTCTGTGTT 
    GTGTCCTAAA TAGCTTACTC TGTAATGGAG GCATCACCAG TAGATATGTC 
    AGAAAATTAG AAGCAACCGT TGATATGCCT CTTGATAGCG ATGTTTTTCG 
    TGTTCCTTGT GGCTACAATG CTCCTCAACA GGTGCATATA ACACAAGGAG 
    ATGTAGAAGG AAAGGCAGTG ATAGTATCAT GGGTGACACA AGAAGCAAAA 
    GGATCTAACA AAGTCATTTA CTGGAAAGAG AATAGCACCA AAAAGCACAA 
    AGCTCATGGC AAAACCAATA CTTACAAGTT CTACAATTAT ACTTCTGGTT 
    TTATCCATCA TTGCCCTATC AGAAACTTAG AGTATGACAC CAAGTACTAT 
    TATGTGTTAG GTGTGGGACA AACGGAGCGT AAGTTTTGGT TCTTCACTCC 
    TCCTGAGATC GGTCCTGATG TTCCCTACAC TTTTGGTCTC ATTGGGGATC 
    TTGGGCAGAG TTATGACTCA AACATAACCT TAACACATTA TGAGAATAAC 
    CCAACAAAAG GGCAAGCGGT TTTGTTCGTC GGCGATATCT CATACGCTGA 
    TACTTATCCG GATCATGACA ATAGGAGATG GGACAGTTGG GGAAGATTTG 
    CTGAAAGAAG CACAGCTTAT CAGCCTTGGA TTTGGACTAC CGGAAACCAT 
    GAACTCGATT TTGCCCCGGA GATTGGTGAA AACAGACCGT TTAAGCCGTT 
    CACGCATAGG TACCGAACTC CTTACCGATC ATCAGGCAGC ACCGAACCAT 
    TCTGGTACTC GATAAAGAGA GGACCGGCTT ACATAATCGT GCTAGCTTCA 
    TATTCAGCAT ATGGAAAATA CACACCACAG TACCAATGGC TCGAAGAGGA 
    GTTCCCAAAG GTTAACAGAA CGGAAACTCC GTGGTTGATT GTTCTGATGC 
    ATTCACCATG GTACAACAGC TATGATTACC ATTACATGGA AGGTGAAACA 
    ATGAGGGTAA TGTATGAGGC TTGGTTTGTC AAGTACAAAG TAGATGTAGT 
    TTTTGCAGGT CATGTCCACG CCTACGAAAG ATCGGAACGT GTATCAAACA 
    TAGCTTACAA TGTTGTTAAC GGCATTTGCA CTCCAGTCAA AGATCAATCA 
    GCTCCAGTCT ATATCACCAT TGGTGATGGA GGCAATATTG AGGGCTTGGC 
    TACCAAAATG ACTGAGCCTC AGCCTAAGTA CTCTGCCTTT AGAGAAGCAA 
    GCTTCGGGCA TGCTATATTC TCGATAAAGA ACAGGACGCA TGCTCACTAT 
    GGATGGCATA GGAACCATGA TGGTTATGCT GTGGAGGGTG ACAGAATGTG 
    GTTTTATAAC AGATTTTGGC ATCCTGTTGA TGATTCTCCT TCTTGTAATT 
    CTTGAGAATC TATGAGGAAT AGGATTTGTT GTATCTCTAT GATTGAACAA 
    CCATCCAAAT AAATGAATTG TTTGA

    Gene models with high sequence identity

    1. AT2G16430.2 [+] show detail - purple acid phosphatase 10
      E-value: 0; Score: 99.93

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Purple acid phosphatase, N-terminal 1.5e-38
    Gene3D no description 3.2e-113
    superfamily Metallo-dependent phosphatases 7.9e-99
    superfamily Purple acid phosphatase-like, N-terminal 1.6e-40
    HMMPfam Metallophosphoesterase 7e-27
    HMMPanther ACID PHOSPHATASE RELATED 4.7e-161

    See the detailed result >

    AT2G16430.2

    Model type
    Protein coding
    Short Description
    purple acid phosphatase 10
    Computational Description
    purple acid phosphatase 10 (PAP10); FUNCTIONS IN: protein serine/threonine phosphatase activity, acid phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cell wall, plant-type cell wall; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Purple acid phosphatase, N-terminal (InterPro:IPR015914), Metallophosphoesterase (InterPro:IPR004843), Purple acid phosphatase-like, N-terminal (InterPro:IPR008963); BEST Arabidopsis thaliana protein match is: purple acid phosphatase 12 (TAIR:AT2G27190.1); Has 1830 Blast hits to 1814 proteins in 380 species: Archae - 3; Bacteria - 548; Metazoa - 186; Fungi - 79; Plants - 763; Viruses - 0; Other Eukaryotes - 251 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR