F15435

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F15435

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F15435

Determination of introduced cDNA(s)

  • RAFL09-20-P11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-20-P11 - Resource: pda08017

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-20-P11 - full reading 
    CTGCCCCGGA AGTTTCTAAT CTCTCTCTCT TTCCTAAAGT AACAAACTTT 
    AAATTTTCTG CAAAATCGAA CAACGAATCA TCAGCCCGAG AAGCTTCTTC 
    AATCCTGTAA ATTTTTCATT CTACGTACCA ATCTCTCATT TCCCAGATTC 
    GTTTCTTGCT TCCATTGCTC TTCCTTTGTA CCAATCATCA TCTCCAGGTG 
    ATCGGTTTAT TAAAAATTAG GGTTTTTGAT TGTTCTAATC CGATCTCTCG 
    GTTCCTTTAA GATTGATGAT GAATTTCGAA GCGTGATATA AAAAGATCTG 
    AAGACTTGAT GTCAGAACTT GCGTTGCGTG GGTTCCGAGA TAATTGTTGA 
    TGGAAAGAGT ATCAGAGCGA AGTTTGTCAG AAAATTTGAG AAGAAGCGAT 
    CGAGAAGATG GGAAGATTAT AGAATGGGAA GAATTCGACC ATGAGCTTAC 
    GAGGTTATGG AGTCTTTCTT CTGCTATGAA ATTAGCCACA GAGAGGAAAC 
    AAATCCTGCA ACCGAAACTT GAGTCTCTTA TTCAGGTTAG TACTGAATCA 
    TTGAGACGCA CTAATGAACT TGAAGAAATG CGTCAGAGGC TTGAAGCAAG 
    AAAATTGTTG GTGGACAAGA CATCAGTTGC TTGCAAAGTT ACTGAGCAGG 
    ATGTTAAAAA GAAAGAGGAG AATCTTAGTA CAGAAGTGAG GTCTTTGCTA 
    GTAGGCGGAA CAACTCTTTC GATCGCTAAA AGCAAATTGC AGGAATCAAA 
    CTGCCAACTA GAAGGAGAAA GTGGTTATGC ACATTTAAAG ATTGTAACGA 
    ATAAGCTGAG AAAGAGGCAG CAGTTCATGG TATCTCAAGT TTCATTTATC 
    TATCCCTTGA AGATTGAAGC TGGACCTTCA CAAGACCAAG AACTGGAATC 
    ATTTCCTGGT GGCAGTAGAT TAGGAACTAA GCCTCTGAGT CAAGGATCTG 
    TGAGAATTCT GGGGTTGCCT TTTAGTATGG CCCCGTTTAC AAAGATGAGC 
    TTCTTCACCG ACAAGAAAGA AGTTCAGAAG TCTGCAACTG CCCTAGGATA 
    TGTAGCCCAT GCCGTGTCAC TAATAGCTCC TTACTTGAGA GTGCCAATTC 
    GTTATCCTTT GTGCCTGGGG GGTTCCAAAA CATACATTCG AGACTATGCA 
    CCTTACATTG AGCCTTCACC ATCAGACATG TCTCCGATTA CCACGCTTTC 
    CCAAAATATT AACTTTGTAG AGTTTCCTCT GTTTCTGGAT GGTCAAGATA 
    CAACACGAGC TGCCTATGCT GTCTTCTTAC TAAACAAGAA CATCGAGCAA 
    CTCTTGAACT TTGTGGGGGA AAATAGTCTA GGACCACGTC AGGTTCTAGC 
    AAACCTGAAG GAGCTAATTC GAATCATCCA ATCTCCAGAT TATATCGATT 
    ATTTATGACG ATGATGATGA TGACGACGAA AATAATGACG ATGATGAAGA 
    TATCAATCCA TTCCTTCTCA CACATCTTCC AGAGTTCCAG TGTCTCTTCT 
    TGTTTATTGA ATCATCTCAA GTCAGACACT TTGTGGAGGT AAAAAAGTAC 
    AAATAATTGA TTTTGTTAGA GAAATTTTAG ACATGGAAAT TCTCTTTAGG 
    ATGAGACTCC TCCTCTCTAG ATGTGATGTT TTTGGTTTGG AGAGACCGAC 
    GATAAACGAA AGCTTAGTCT ATTATACAGT TCTTTCTTAA GTTCT

    Gene models with high sequence identity

    1. AT2G32760.1 [+] show detail - unknown protein; Has 229 Blast hits to 229 proteins in 104 species: Archae - 0; Bacteria - 2; Met...
      E-value: 0; Score: 99.94

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SUBFAMILY NOT NAMED 1.6e-22
    HMMPanther FAMILY NOT NAMED 1.6e-22
    HMMPanther SUBFAMILY NOT NAMED 1.3e-130
    HMMPanther FAMILY NOT NAMED 1.3e-130

    See the detailed result >

    AT2G32760.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 229 Blast hits to 229 proteins in 104 species: Archae - 0; Bacteria - 2; Metazoa - 79; Fungi - 90; Plants - 49; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR