F16409

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F16409

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F16409

Determination of introduced cDNA(s)

  • RAFL09-36-L15 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-36-L15 - Resource: pda08252

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-36-L15 - full reading 
    AGAAACTGAT TTGATAAAAA AAAATATCTT CGTTGAAGTG AGGGTGACGA 
    GAAGTTTCTG CTTTCATCAA TTAAAGGTTT ACGCGTGAAG CAGATCATCA 
    GCAATGGCGG CGTCGCAAGA TAAGTTGGAT AAGATGAAAC TTAGGCAAGA 
    TTACCGGAAT TTATGGCACT CCGATCTCAT GGGCACCGTC ACCGCCGACA 
    CTCCCTATTG CTGCATCTCG TGTCTGTGTG GACCTTGTGT GTCATACATG 
    CTTCGGAGAA GAGCACTTTA CAATGACATG TCAAGGTATA CTTGCTGTGC 
    TGGATATATG CCCTGTAGTG GAAGGTGTGG AGAAAGCAAA TGTCCTCAAC 
    TTTGCCTTGC CACTGAGGTC TTCCTTTGCT TCGGAAACTC TGTGGCCTCT 
    ACCCGCTTTC TTCTGCAGGA TGAATTCAAC ATCCAGACAA CACAATGCGA 
    CAATTGCATA ATTGGATTTA TGTTCTGCCT CAGCCAAGTT GCTTGCATAT 
    TCTCTATAGT TGCTTGCATT GTTGGTAGTG ATGAACTTTC CGAGGCTTCT 
    CAGATACTCT CTTGCTGTGC TGATATGGTC TACTGCACGG TCTGCGCATG 
    TATGCAGACA CAACACAAAC TTGAGATGGA CAAAAGAGAT GGAGTGTTTG 
    GATCGCAGCC AATGGGTGTG CCACCAGCTC AGCAGATGTC TCGTTTTGAT 
    CAACCTGTCC CTCCTCCAGT CGGATACCCT CAGTCCTATC CACCGCCTGC 
    TCAAGGCTAC CCTCCTGCAT CTTACCCGCC TCCCGGTTAT CCTCAGCATT 
    AAGAAATTTA ACCAGTATCT TCATTTTATG TGTCAAAGTG TTGTTGTTAC 
    TTGGTTTAGG TGTGCAGAAC TATTATATTG TTCAGCTTTG TCCTCTGCTT 
    ATTTCTGCGA TTTATTTATT TTGAGGTATT GGTACTCTGG TTATGTCTGA 
    AAAGCTTTTG CTATCATCAA CTGGTTTGTT GACTTTGGTA TTTAAGTAAA 
    GAAAAAGAAC AACATATGTA TTAGCTAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT1G63830.1 [+] show detail - PLAC8 family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G63830.1

    Model type
    Protein coding
    Short Description
    PLAC8 family protein
    Computational Description
    PLAC8 family protein; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G41390.1); Has 476 Blast hits to 386 proteins in 125 species: Archae - 0; Bacteria - 22; Metazoa - 109; Fungi - 21; Plants - 191; Viruses - 0; Other Eukaryotes - 133 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR