F18136

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18136

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F18136

Determination of introduced cDNA(s)

  • RAFL06-89-J21 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-89-J21 - Resource: pda12272

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-89-J21 - full reading 
    ATTTAACTTT TGCCTCTCTT TTCTCCTCGT GAAGGAAAAT TCTTTAGTCA 
    TTTTTTCTCT CCTCGAGAAT TACGCAAACA CAACAAAAAC CCAGACATTG 
    AAAAGTAAAA AACAAAAACA GAGAAAGTGG GAGATAGAAG ATGACGGCAT 
    CAGGAGGAGG ATCAACGGCG GCGACGGGGA GGATGCCGAC GTGGAAGGAA 
    AGAGAGAACA ACAAGAAGAG AGAAAGAAGA AGAAGAGCAA TAGCAGCTAA 
    AATCTTCACC GGACTTAGAT CTCAAGGCAA TTATAAACTT CCTAAACACT 
    GTGACAACAA TGAAGTCCTC AAAGCTCTTT GTCTTGAAGC TGGTTGGATC 
    GTTCATGAAG ATGGCACCAC TTATCGAAAG GGTTCTCGAC CAACAGAAAC 
    AACAGTGCCG TGTTCGTCAA TCCAACTTAG TCCACAATCA TCGGCCTTTC 
    AAAGCCCAAT TCCTTCGTAT CAAGCTAGCC CTTCATCGTC ATCTTACCCA 
    AGTCCGACCC GGTTTGACCC GAATCAATCC TCGACTTATC TCATTCCCTA 
    TCTCCAAAAC CTAGCTTCGT CTGGAAACCT CGCTCCTCTA CGAATTTCCA 
    ATAGTGCCCC TGTTACACCG CCGATTTCTT CACCTAGAAG ATCAAATCCG 
    AGACTTCCGA GATGGCAAAG CAGTAATTTC CCAGTCTCAG CTCCGTCAAG 
    CCCAACACGG CGTCTCCATC ACTACACATC GATTCCAGAA TGCGATGAAT 
    CGGATGTTTC GACGGTTGAT TCTTGTCGAT GGGGAAATTT CCAATCGGTT 
    AACGTTTCTC AGACATGTCC TCCGTCGCCG ACATTTAACC TGGTCGGAAA 
    AAGCGTTAGC TCCGTCGGAG TAGATGTGTC GGTGAAGCCG TGGGAAGGTG 
    AGAAGATTCA CGATGTTGGT ATCGATGACT TGGAGCTGAC GCTAGGTCAC 
    AACACCAAAG GACGCGGCTA GGTTAATATC GTGGTTTAAC TATTTAGTCG 
    GGTCCGGTAC GAGATTGGTT CCGGTTAAAT CGTAGCTAAT AGATTGGTCT 
    TTGTCTTCAT GACTATTTTG TACAGTCATT ATCATTTATC AATGCTTCAT 
    TTCACAAAAT CTAGTATTTT TTTTTTTATA TGTAATGGTG GATAATGAAA 
    AATGCAAGTG TGTGAAAGTT AGAGTAACCA CTCCCCATGT GATGATGGGG 
    TCATGTGAAT GTGATCTCTA ACCACGCATG ATTTTTCAAT GTGCCTATCT 
    ATATAAACAC ACCATTTTTA GTG

    Gene models with high sequence identity

    1. AT3G50750.1 [+] show detail - BES1/BZR1 homolog 1
      E-value: 0; Score: 99.92

     

    InterPro Scan Digest

    See the detailed result >

    AT3G50750.1

    Model type
    Protein coding
    Short Description
    BES1/BZR1 homolog 1
    Computational Description
    BES1/BZR1 homolog 1 (BEH1); FUNCTIONS IN: transcription regulator activity; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: BZR1, transcriptional repressor (InterPro:IPR008540); BEST Arabidopsis thaliana protein match is: Brassinosteroid signalling positive regulator (BZR1) family protein (TAIR:AT1G75080.2); Has 1801 Blast hits to 330 proteins in 47 species: Archae - 0; Bacteria - 4; Metazoa - 13; Fungi - 27; Plants - 263; Viruses - 0; Other Eukaryotes - 1494 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR