F18219

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18219

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F18219

Determination of introduced cDNA(s)

  • RAFL09-33-E07 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-33-E07 - Resource: pda08215

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-33-E07 - full reading 
    AATAAAGGCC AAAAATAGAG AGTTTTTCTC TGGATCACAT TATCTCTTTC 
    TTTTTCTTCT TCTTCTTCCT CATGGATTCT TTAAGAACTC GAAATGTATC 
    CAAAAGATCC GATCCGATCA ACTTTCCGGC GAAGTCATCC ATTTCATCCC 
    GGAGATCATT ATCTTCTTCT TCTTCCTTCT CATCTTTTTC CTCCTGCTCC 
    TCTAGCTCCC TTGTCTTTCC CGGCGACTCT CCTCTGAATT CTCCGGCGAC 
    TCCTCTCCGT CTACTCGGTG TCCCTTTTTC ATGGGAACAA CTTCCCGGAA 
    AACCTAAAGA CTACTCTCAT AGACTCAACA ACCGTCGAAA CAATGAATCT 
    TCAAATCTAT TGCTACCCCT CCCTCCTCAC CGGAATATTT CCTTTCCGGC 
    CACCGGAAAA AAACCTAAAC CTAACAATTC CAGTAAGAAG AACAGCTTCC 
    CCGTGACCGG AAAAGATCCC TTCGCGGCTG CGTTGTTGGA ATGTTCCAAA 
    GACGAAGGAA CAAACAGTGA CAACGATGAT GACGTCGACG GTGTTGAAGA 
    CGTAGATCGA AGGTTTCGAG GAAACTCCGG TGGTTCAAGC AAGGTGTTGT 
    CAAAGAACAG CATCGGAGAC AGGTTTGGGT TAGTAAATCT CTACGGTTCT 
    TGTCGGAGAA CTTGTGCAGT AACAGAGTCC ATTGTTTATC TTCCAAGAGC 
    AAGAAAAGCT GCTTCGTACG ATAATCTTCT TCCACGTCGT CGCTGTTGAT 
    TTGTTCGTAT TTGGTGATTT ACTACATATT TTTGTCTTTT TTTGTGGGTT 
    AAATTCTGTA TAATTTTCTC TGAATGTGAT ATATTATGGG TTTATGAGTT 
    TGTGTTTTTA TTTTTCTCTC TTTAGATCGT GACATGAATG TAGTATAATT 
    CCGAGACGTT GTTTACTTGT AGAAGTTGTA ACCATAAATC CATGATATAG 
    CATATTCACC

    Gene models with high sequence identity

    1. AT1G71970.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G71970.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22680.1); Has 58 Blast hits to 58 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR