F19337

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19337

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19337

Determination of introduced cDNA(s)

  • RAFL06-82-I17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-82-I17 - Resource: pda03835

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-82-I17 - full reading 
    AGATCCTTAT TCTTCTCCAC CGGATCTCGA AATCGGAGAA TTAGCCAAAC 
    GATGGCCGCC GACGGAATAT TCCGCAGCAT CTTCGAGGGT TGTATCTCCG 
    GCCTTGATTC CGCCATCGAA CGGCGTCCTT ACCACAAAAA CTGCGGATGT 
    GCTCTTCACG ATAAATCAAG TGGCGCTGGG AAAAATCAAA ATCAGCGACG 
    GCCGCCGTCT TGTCGCCGCC ACGGAAGCTC AGAGAGCATC TCGTTCCCGA 
    TCCGAAGGTC TTGGAGCGAA GGCAACATCA TGGCTATGAA TCTCTTCTCC 
    TCATCGTCGT CTTCTTCTAA TCTCCAATCG CTTTCTTCGT CTTCTTCGCT 
    CTCAAATCTG GCATCAGATT TACCGGTGGA TAATGCTGCG ACGGAGGAAC 
    CGAGCAGATC TAATAAACAG CTACGATGGA CGATTGATGA AGGTGAAGAT 
    GATTGATGAT GATGATGATC AATTCCAGGT TGTTAACTTT TGCTAATCTC 
    TGTTTAATTA AACTTCTCAA TCATTGTATT TGAGAACCAA ATAATGTCAG 
    TCATTGTATT TTTATTTTTT TGTAAAAGAA ACGAAAATGT TTGTTTACGA 
    TTGAAACTTT GAATGATTAG CATATAAACT TGTGGAGATT AAAAAAAAAA 
    AAAAAA

    Gene models with high sequence identity

    1. AT2G46490.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G46490.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35110.1); Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR