F20303

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20303

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F20303

Determination of introduced cDNA(s)

  • RAFL05-18-G08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-18-G08 - Resource: pda02757

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-18-G08 - full reading
    AAAAGCATTT GGTAGTCGTA ACCAAAACGC CAAATCATTA CCGTTCAACT 
    GAAATCTAAC AGAGAGCCCT CTTTTCTTGG GAATTCGATT CCTTGTACGT
    TATCTTCTTC TTCTTCTTCT CTTTCTCAAA ATTCGTGTAT CTTCTGGGAA
    ATTTTCAGAT TTAGATGGAG AAAGGGGTTG GATTTGAGAA AGACATGAAG
    ACAGTCAGTG ATGGGTTTGT CGGAGGTTTT TTCCCTGTCT CTACCACCAA
    GATCGCGTGG AAATCAAGAA AAAGATCAGC ATTGTTGAAC CTAGACAAAG
    CACCGGAGGC TGTTACGGAG GTCACACCAG AGAAGAACGA GATAACAGCA
    ATGGATACCG AGAAAGTTGG GGAACCAATG ACCACAACTC CTCTTCTGTC
    CGAGAAAAGG AAAGCTCTGT TCGAGCCACT TGAACCCATT ACGAACTTGA
    ACGGAAAGCG ACCAACTGCG GCTGATTCAT TGTTGCCACC GCCGGATTTC
    GAGACTGCAA ACTACCCAAA AGGCTGGTTG ATCGGTAAGA AGAGGAAGCT
    TGTGAATGTT GATGTAGTTG AGAGCATGCG TAGAATAGCT GTCCAAGAAA
    TGAACAGAAA GGATCGAGAG ATAGATGGGT TAAACGAGCA GCTAGAAGAG
    GATTCACGGT GCTTAGAGCA TCTACAGCTT CAGCTGCTAC AAGAGAGAAG
    CAAGAGAACA GAGATTGAAA GAGAGAACAC AATGTTGAAA GAGCAAGTTG
    ATATGCTTGT GAACATGATA CAAGAAGATG ACGAAGAAGG AGCTGAAGAA
    CCCTAAGCTA GTTCTCATCA AATTTATGTC TCACCTATAA TAGCTGTGTT
    CTGTTTTTTT TATTCTTTTG TAGATTTGTC TCGTCCACAA AAAAGAAGAA
    AAGAAAGAAG CTTAACCATC TATTATTTGG TTAAGCTACT CTTGTTCCCT
    TGTGTGATAG AACAAAACAT AATCAAGAAC ATTATATATT CTAAGTAAAA
    AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT1G80940.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther PTHR22986:SF13 0.000309999945899369
    HMMPanther PTHR22986 0.000309999945899369

    See the detailed result >

    AT1G80940.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR