F21544

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21544

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F21544

Determination of introduced cDNA(s)

  • RAFL09-61-C09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-61-C09 - Resource: pda08510

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-61-C09 - full reading 
    ATGGCGTATA GAAGAAGGCA GGGGATCGGA AAGTTTGCGA CTTTCAAGGA 
    GGAGGTTGAT CGGCTTCCCC CGGAAAGCAT CACCGCCGTC AAGGATAGAT 
    CACCGCCAGC TCGATCCTCC CCTGCTTTTG ACCAACCCAG ATCTAAGAAT 
    TTTACGACCG AGCCAAAGGG CTTGTGGGGA GTCATAGCCC AGAAAGCAAA 
    ATCTGTTATT GAAGATGATA AATCTAGTGA TCGCTCTACA ACAGCTTCTC 
    AGTCCCGGTT TTCATACCTA TCAGATGAAG GGTTCAAGAA AATGGACAAT 
    CCCAAGCTTC GGAGGGGGCT GGATAAGCTT ACATCTTCTC TTAATCAGAT 
    CGGTGACACT TTTGAAAAAG CCTTTGAGGA TGGCCGAACA CTCGTTGAGA 
    ACAAAACAGC TGATATCATC CAGGAAACAC GAAAACTTCA AACCAGACGA 
    AGAGGAACTG GTGGTGAAGA TGAGAATCAG AATCAATCTT ATGGAGTTAG 
    TAGCTCATGG AAGAAGTCTC CAGAGCAGCC AATGCAGTTA AATCATATAG 
    AACATGAAAC TCAACTCAAG GCATCTCGCG ATGTGGCGAT GGCCACTGCT 
    GCTAAAGCTA AACTACTCCT CCGTGAGCTG AAAACTGTCA AAGCAGATCT 
    TGCATTTGCG AAAGAGCGTT GTGCTCAGCT TGAGGAAGAG AACAAACATC 
    TGAGAGAGAG CCACCGTGAG AAAGGAAGCA ACCCTGCAGA CGAAGATTTG 
    ATTCGACTCC AGCTGGAGAG CCTACTGGCA GAGAAAGCAC GGTTGGCTCA 
    TGAAAATTCT GTGTATGCGA GGGAAAACCG GTTCTTGAGG GAGATAGTTG 
    AATACCACCA GCTTACGATG CAGGACGTTG TGTACATAGA CGAGGGCAGT 
    GAAGAGGTGA CACAAGTTTC CCCTTTCGTA TCGACGTTGA TGACTTCTTC 
    ACCCGCTGAC CGTTCACAGT CTCCTCCTAG TCAAGAGATG ATTAAAGAGA 
    TGCTTGTGGT TGCTGAAGAG AGCTCTGTGT GTGCAAGTGT GGTTTCAGTT 
    TCTTGAATTC ATTATTATTA ATTATTTCTT CTTGAATGAA ATCAGATTGT 
    TTTTTG

    Gene models with high sequence identity

    1. AT5G01970.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G01970.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR