F23528

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23528

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23528

Determination of introduced cDNA(s)

  • RAFL09-33-B17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-33-B17 - Resource: pda05979

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-33-B17 - full reading 
    ATGGGACAAT GATTGAGGCA CCTGAAGAGA ATCTTTGGTT ATCTTGTGAC 
    CTTGAAGATC AAAAGGCACC ACTACCGTGT ATGGATTCTA TATATGCTGG 
    TGATTTCAGT TACGATGAGA TTGGATTCCA ATTTCAAGAT GGTACCAGCG 
    AACCAGATGT ATCACTAACA AATTGTTGGA GGAGGTGTTC AATAACCCTG 
    ATGACTTCTC TTGCGAGGAA TCGATCAGTC GAGAGAATCC AGCAGTCTCA 
    CCAAATGGGA TATTTTCATC TGCTAAAATG CTGCAGTCTG CAGCACCAGA 
    GGATGCTTTC TTCAACGACT TCATGGCTTT CACTGATACA GATGCTGAGA 
    TGGCGCAATT GCAGTATGGT TCAGAAGGTG GAGCTTCTGG TTGGCCAAGT 
    GACACTAATT CATACTATAG TGATTTGGTT CAGCAAGAGC AAATGATCAA 
    TCATAACACA GAGAACAACC TCACAGAAGG GAGAGGGATA AAGATCCGGG 
    CTCGACAGCC TCAGAACCGG CAGAGTACAG GATTGATAAA CCAGGGTATT 
    GCTCCAAGGA GAATCCGTCT GCAGCTGCAG TCTAACTCTG AAGTAAAAGA 
    ACGAGAGGAG GTGAATGAAG GACACACTGT TATTCCCGAG GCCAAAGAAG 
    CTGCAGCTAA ATACTCAGAG AAGAGTGGTT CTTTGGTTAA ACCTCAAATA 
    AAGCTCAGGG TGCGGGGAAC TATAGGCCAA GTAAAAGGAG AGAGATTTGC 
    AGACGACGAG GTACAGGTGC AGAGCAGAAA GAGACGAGGA GGGAAGCGAT 
    GGAAGGTGGT TGCAACGGTA ATGGTGGCTG TGATGGTTGG GGTAGGGATG 
    GGTATATGGA GGACACTGGT GAGTTCATGA CACATGAGAC ACAAAGAGAG 
    AGAGAGAGAG AATCAAATGT AGTTTAATGT AATTAGGGAT GATGCAATGT 
    TAGCATGTTT GTGTGTTGTA ACTTAAAAAC TTATTTAGGA ATCTGATAAA 
    AGTTACTGTT GAAAAAAAAA AAAG

    Gene models with high sequence identity

    1. AT4G35580.1 [+] show detail - NAC transcription factor-like 9
      E-value: 0; Score: 99.80

     

    InterPro Scan Digest

    See the detailed result >

    AT4G35580.1

    Model type
    Protein coding
    Short Description
    NAC transcription factor-like 9
    Computational Description
    NAC transcription factor-like 9 (NTL9); CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC 014 (TAIR:AT1G33060.1); Has 3027 Blast hits to 3020 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3027; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR