F23732

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23732

Determination of introduced cDNA(s)

RAFL07-08-H24 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL07-08-H24 - Resource: pda03975

full reading [+] show sequence

AAAAAAAAAC TTCACAGAAA CAACACCTCG ATCTCATCGA AGCTCCTCTC 
TCTTACATAT CATCACTTCA CATCAACCAA ACCTACTTCT GTCTCTCTCT 
CTCGCTCTCT ATCTCTCACG CTCTCACAGT AGAAGAAAAA ATTAGAAAGG 
TTGTGAGAAT GGCGGCTACA GCAGCTTCAA GCTTACAAAT TGCTACACGA 
AGGCCGAGCA TGTCTTCGCC TAGCAAAATT CTTAAAGCAG GAACCTACAT 
TGTTGGTGCC AATCCTGGAA ACGCTTCATG GGATAAACTT TCATGCACTC 
GCCAATTATC AAACCTTGGA TGTTTGAGAA ACCACAGTGC TGTTCCAACT 
TGTAAGAGAC CCTTTTCTTT TTCCACAAGG GCAATGTCTG AATCCAGTGA 
AAACAAGGCT CCTTCAGGGC TTCCAATTGA TTTGAGAGGG AAAAGAGCTT 
TCATTGCTGG TATAGCTGAT GATAATGGCT ATGGTTGGGC CATAGCAAAA 
TCTCTTGCTG CTGCTGGAGC TGAAATATTG GTTGGGACTT GGGTTCCTGC 
ACTTAATATA TTTGAGACAA GCTTGAGACG TGGAAAATTC GACCAGTCAC 
GAGTGTTGCC TGACGGGTCA TTGATGGAGA TTAAGAAGGT TTATGCTTTG 
GATGCTGTGT TTGACAATCC TGAAGATGTG CCTGAAGATG TGAAAACGAA 
TAAGCGATAT GCAGGATCGT CAAACTGGAC CGTACAGGAA GCTGCTGAAT 
GTGTGAAAAA AGATTTTGGA AGCATTGACA TTCTTGTCCA TTCCCTTGCA 
AATGGCCCAG AGGTTAGCAA ACCTCTTCTG GAGACATCAA GGAAAGGCTA 
TCTCGCTGCT ATCTCTGCTT CGAGTTACTC CTTTGTTTCC TTGCTGAGGC 
ATTTTCTGCC AATTATGAAC CCAGGAGGTG CTTCAATATC TCTTACTTAC 
ATTGCCTCTG AAAGAATCAT TCCTGGGTAT GGTGGAGGTA TGAGTTCTGC 
CAAAGCTGCA CTAGAGAGTG ACACACGGGT GCTTGCATAT GAAGCTGGAA 
GGAAATCAAA CATTAGGGTC AACACCATCT CTGCGGGTCC TTTGGGAAGC 
CGAGCAGCAA AAGCCATTGG GTTCATAGAC ACCATGATTG AGTATTCCTA 
CAATAATGGG CCTATTCAGA AAACACTGAC CGCAGATGAA GTTGGGAATG 
CAGCAGCCTT CTTGGCATCT CCATTGGCCT CTGCCATAAC CGGTGCAACC 
ATATATGTGG ACAATGGTTT GAATGCAATG GGCGTTGCAC TGGACAGCCC 
GGTGTTCAAA GACCTTAACA GCAAGAATTA GAGTCTTGAT CGACGACTGG 
ACTCGAGAAA TTCCGTGTTT TCGTGAGCTT GCTTGTTTCT TTATGAGTTA 
GTATGTACGG CATATGTTCC CCATCGGCTG TCTTTTTTTT TCTTTCTTTA 
AGAGAATAAA TTATGGTTCT AGGTTGGGTC ATTTAGCAAC TATATATGTA 
GTGATGGATT ATTATTCCTC TTATGATTGA AAATTTGCAA GTGAGAAAAA 
AAAAAAAAAA A

Gene models with high sequence identity

AT2G05990.1 [+] show detail - NAD(P)-binding Rossmann-fold superfamily protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Enoyl-[acyl-carrier-protein] reductase (NADH)	5.2e-132
HMMPanther	Short-chain dehydrogenase/reductase SDR	5.2e-132
FPrintScan	Glucose/ribitol dehydrogenase	1.5e-10
FPrintScan	Glucose/ribitol dehydrogenase	1.5e-10
FPrintScan	Glucose/ribitol dehydrogenase	1.5e-10
FPrintScan	Glucose/ribitol dehydrogenase	1.5e-10
Gene3D	NAD(P)-binding domain	5.6e-67
superfamily	NAD(P)-binding domain	4.8e-61

See the detailed result >

AT2G05990.1

Model type: Protein coding
Short Description: NAD(P)-binding Rossmann-fold superfamily protein
Curator Summary: Encodes enoyl-ACP reductase a component of the fatty acid synthase complex. A reduced function mutation in this gene, mod1, was found in a screen for premature cell death mutants. Mutant plants have reduced lipid level and pleiotropic morphological defects, including chlorotic and abnormally shaped leaves.
Computational Description: MOSAIC DEATH 1 (MOD1); FUNCTIONS IN: enoyl-[acyl-carrier-protein] reductase (NADH) activity, oxidoreductase activity, enoyl-[acyl-carrier-protein] reductase activity, copper ion binding; INVOLVED IN: fatty acid biosynthetic process; LOCATED IN: fatty acid synthase complex, thylakoid, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198), Enoyl-[acyl-carrier-protein] reductase (NADH) (InterPro:IPR014358); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT2G29260.1); Has 34697 Blast hits to 34681 proteins in 2732 species: Archae - 268; Bacteria - 25258; Metazoa - 667; Fungi - 643; Plants - 667; Viruses - 0; Other Eukaryotes - 7194 (source: NCBI BLink).
Link: InterPro Scan - TAIR