F24840

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F24840

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24840

Determination of introduced cDNA(s)

  • RAFL06-82-C19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-82-C19 - Resource: pda03821

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-82-C19 - full reading 
    AAGAAGCAGA ACACAAGAAA CGTGAGAAAC TTTGAGAAGA CCAAGAAGAA 
    GAAGCAGAAG AAGAAGAAAA TGAAATTGGT TTGGTCTCCG GAAACAGCAT 
    CAAAGGCTTA TATAGACACC GTTAAATCGT GTGAGAATCT TGAAACGCCG 
    GACGCGGCGG AGCTAATAGC GGCGATGGCG GCGGGATGGA ACGTGAAGCT 
    GATCGTGGAA ACTTGGTCAG AAGGAGACGC AATAGCTTCA AGTATTGGTT 
    TAAACGTAGC AAGCAAACAC GCAAACGCTA AACACATATG TATAGTACAA 
    AACTCAAGAT CAGAATCTGC TTATCTCCAA GCTATTCAAG AATCTTCATC 
    TCCCTTGAAC TTTCCAGAGA CTATCGTCGC TGAAGAACCC GGAAAAGCGA 
    TGAAGAAGCT ACAAGGAGTC GACTTCTTGG TCGTGGATTG GCGGAACAAA 
    GAATTTGCAG CGGCTGCGTT GAAAAACGCT GCGTTTGGAA ACAGAGGAGC 
    TGTTGTGGTT TGTAGAAACG GGTATTCGAG CTTGAGAAGG GTTTTAAGAG 
    ACCGGAAAGT TGTTAGAACG GTGACTCTTC CGGTCACCGG AGGTATTGAG 
    ATAGCTCATG TTGCGGCTAG GAACTCAGGG AAGAGTGGTA ACAATAAGAG 
    AAGATGGATC ACACATGTTG ATCAGAGATC AGGAGAGGAA CATGTGTTTA 
    GTATCTAGAA AGTCAGAGAC AAATAGTCAT AAGTGTTTAT TGGATCTTGT 
    ATTTGTTGTG TTTGTACATA AGATGATTCC ATCAGATGCA ATTGTTATTG 
    AAGAAAACAT GCTTGTCTTA TAAATGTGAT CTTTGTGTTG CAAAACAAAA 
    AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT1G12320.1 [+] show detail - Protein of unknown function (DUF1442)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G12320.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF1442)
    Computational Description
    Protein of unknown function (DUF1442); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1442 (InterPro:IPR009902); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1442) (TAIR:AT1G62840.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR