F27027

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27027

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27027

Determination of introduced cDNA(s)

  • RAFL09-21-N09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-21-N09 - Resource: pda08030

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-21-N09 - full reading 
    ATCCAAAAAT TCATATCTTT CCTTCATTTT TATTGGCGTT TTAAGAAAAC 
    AAAGCTTCCC CAATTAGGGT TTTGTATTAG AAGAATGGGA TTGTGGAATG 
    GAAAAGGCAC CGGAGGATTT ATCCTCTACC TTCTCGTGGC TTTCTCCGTC 
    GCCGTCTTCT CTGTTTCTTA CGTCGGAGAC ACAACAAACC CTATTCATCA 
    TCATCTCTCT TCTCTCTCTG CCACCGAAAA AATTTGGCCG GATTTGAAGT 
    TTAGCTGGAA ACTTGTGTTG GCTACAGTGA TAGCGTTTCT AGGATCAGCT 
    TGTGGGACTG TTGGTGGTGT TGGAGGTGGT GGGATTTTTG TTCCTATGCT 
    CACTCTTATA CTCGGGTTCG ATACAAAATC CGCAGCTGCA ATATCAAAAT 
    GTATGATAAT GGGAGCATCA GCATCATCAG TTTGGTACAA TGTACGAGTT 
    CGTCATCCGA CAAAAGAAGT ACCAATCTTA GATTATGATC TTGCTCTTCT 
    CTTTCAACCA ATGCTTCTTC TCGGTATCAC TGTTGGTGTT TCTCTCAGTG 
    TTGTGTTCCC TTATTGGCTC ATTACTGTCC TCATCATCAT TCTTTTCGTC 
    GGTACTTCTT CGAGATCTTT TTTTAAAGGC ATTGAGATGT GGAAGGAAGA 
    GACATTGTTA AAGAACGAAA TGGCGCAGCA ACGAGCTAAT ATGGTTAATT 
    CCCGGGGAGA ACTTTTAATC GATACAGAGT ATGAGCCGCT TTACCCGAGA 
    GAAGAAAAAT CAGAGCTGGA AATAATACGC TCCAACCTCA AATGGAAAGG 
    GCTTCTAATT CTAGTAACTG TGTGGTTGAC TTTCTTGCTC ATTCAAATTG 
    TCAAGAACGA AATAAAGGTC TGCAGCACAA TATATTGGAT ACTATTCATC 
    GTACAGTTCC CAGTTGCTTT AGCGGTGTTT GGGTTTGAAG CAAGCAAATT 
    GTATACAGCG AACAAAAAGA GGTTAAACAG TGGCAACACT GAATGTATCT 
    GTGAAGCTAC GATTGAGTGG ACTCCTCTGA GTCTAATCTT CTGTGGTCTC 
    TGTGGTCTCA TTGGAGGTAT CGTAGGTGGT CTCCTTGGAT CCGGTGGTGG 
    ATTTGTTCTC GGGCCTTTGC TTCTTGAGAT TGGAGTCATC CCACAGGTTG 
    CTAGCGCAAC AGCTACCTTT GTGATGATGT TTTCTTCGTC CTTATCCGTA 
    GTCGAGTTCT ATCTCCTCAA GAGATTCCCA ATACCATACG CAATGTACTT 
    GATTTCGGTA TCGATTCTTG CCGGTTTTTG GGGACAATCC TTTATAAGAA 
    AGCTCGTGGC GATCCTGAGA AGAGCTTCCA TAATCGTTTT CGTTCTCTCA 
    GGAGTCATTT GTGCAAGTGC TCTCACAATG GGAGTGATTG GGATAGAGAA 
    GAGCATAAAG ATGATACATA ACCATGAATT CATGGGATTC TTAGGATTCT 
    GCAGCAGTCA ATGAATCAAC CATCTATCTG AACAAAAATT TCAAGTGTTT 
    TGTTTTCATT TACTGGACAA TTTCGGTTGT CCAACACCAT TATTGTGAGA 
    AGTTATAAAA TTAGATTGTT TTACTTGCAG TCCAAGTCAT TTGTGCTCTG 
    TTCTTGGTCA ATACATAGTT GACCATCTTC AGAAATAGAG TTTGTCTAAA 
    TTGTTGTCAT TGTGTTTTGC TTGTATTCAA ACGTTGTATT ATTATTTGCG 
    AGACGATAGA TAAAATAAAA ATGGAAGTCT TTTTCTATCC

    Gene models with high sequence identity

    1. AT2G36630.1 [+] show detail - Sulfite exporter TauE/SafE family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF81 5.2e-10
    HMMPfam Protein of unknown function DUF81 2.1e-14
    HMMPanther ATP-DEPENDENT PROTEASE (CEREBLON) 1.2e-70

    See the detailed result >

    AT2G36630.1

    Model type
    Protein coding
    Short Description
    Sulfite exporter TauE/SafE family protein
    Computational Description
    Sulfite exporter TauE/SafE family protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF81 (InterPro:IPR002781); BEST Arabidopsis thaliana protein match is: Sulfite exporter TauE/SafE family protein (TAIR:AT2G25737.1); Has 1587 Blast hits to 1517 proteins in 484 species: Archae - 83; Bacteria - 808; Metazoa - 0; Fungi - 0; Plants - 200; Viruses - 0; Other Eukaryotes - 496 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR