F28307

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F28307

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F28307

Determination of introduced cDNA(s)

  • RAFL09-91-A14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-91-A14 - Resource: pda09009

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-91-A14 - full reading 
    AGATAGGAAC CATCGAAGAA CACGAGGCGG AGCTATGACG CCGCTTTCTA 
    TATCGGCATC GCCTTCGCCG CCGTGGCCAC TTCTCTCTCC GCCACTATCT 
    TCATCGTCGT TAAACAGAGC TGCTCCGTCT ATTTTTTCCC CTTTCTCTCG 
    AATCAACCAT GGCTTCTCGT GCTCTTTCAT CGCCGTTCAA CGCTTCGCTC 
    TAAGCCGCAA GACAAGGAAG CAGTTACAGG TGGTGGCTAT GGCTCCTGAG 
    GAAGAGAAGC TCACTCGTCG CAATCCTCTC GATTTCCCTA TCGAATGGGA 
    GAGACCAAAG CCAGGGAGGA GACCAGATAT ATTCCCAAAG TTTAGTCCTA 
    TGAAGTCACC GTTGCCTCCT CCTATGCCTT ATGATCCTCC AGAAGAAGAG 
    GAAGAAGAGG AAGAGAAGAA AGAAGAAGAA ACTGAAGATG ACCCTGAAAA 
    GGAAGACGAG GACCAACCCG ATAACCGGTC GTAAGAGGTT TCATTTTTTC 
    TAACTGTTAT TGTTGTTGTT TTTTTGCCTT AGAGACATGT TTAGATCTTC 
    TTTCATTTCA AAGATAAAAT AGAAGTATTG TCAACCCCAC CGAAAGCGCT 
    TTAGTGGAAG CTCTGAACTC ATATTACTAC TTCTGTTTGT TCATCTACTT 
    AACTTCTGAA CTCATATTCC AAAACCAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT3G24506.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G24506.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17240.1); Has 4864 Blast hits to 709 proteins in 125 species: Archae - 0; Bacteria - 592; Metazoa - 786; Fungi - 33; Plants - 410; Viruses - 61; Other Eukaryotes - 2982 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR