F29748

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F29748

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F29748

Determination of introduced cDNA(s)

  • RAFL09-79-I17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-79-I17 - Resource: pda08822

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-79-I17 - full reading 
    ATCACTTTTT AACCCTTTTC GGCTTCTATC CGTCGATTCA AATCGGCGGC 
    AGTTCCCAGC GACATTAATC TCCGGCGAGA CAGTTTACTC GTGTTTATTG 
    AAGCTATGCC TAAAAGAACA GCAGAAGCGT GTCCATCATC TGAAATCCAA 
    AGAAGCAGAG GAGATACTTT TGGTAGTTAC AGATCTCAAG TAGCTGAGCT 
    TTTGTCTCTA GGTGAGAGGA TCTCACATCA TGATCAACAA GAAGCCAATG 
    AGAGGCATTC TGAGAGTGTT ATAGGAGCTG GGATGTCAAA TGTTGAGAAA 
    GATAATTTGA ATGTTTTGTT AAGGCAGTGT GTGAGGAATC TAAGTCCAGA 
    AGTTGATGAG ATGCAGGAAT GTGTACGCTC TCTGTATCTA ATTTCTCAGC 
    TAGGGAACAA ATGTCAGTCA TCGTCGCCGA GCGATTTTGT TCCTGAAGAA 
    ACCGGAGGAG CGAGAGAAGA TGATATTCAA CTACTTCTGA GGTCTGACTC 
    TGATATGGTC AAGAACATAA CGTCACAGTA TTCAAATGTT CTGCTGTCCA 
    AACTGGACAA TATGCAGCAG GAACTCGAGA GACTTCTTGA CGATGTGGTG 
    GCGACTTGCA GACCTATGAC TCGTGGTGAA ATTCGGGAGC TTCAGAAATC 
    GATCAAGGAG CTGCCTGAGA GGAATCTCAA CCGCGTCGCT GAAATAGTAG 
    GAAATCATTG CATAGCATCT GGCAGAGATT TCAACGATAA GGTTATCGTC 
    AACCTTGATC AGGCGGACAA GGTCATGTTA TGGAGATTGC ATTTCTATGT 
    AGGAGCAGTC AAGAGGCCCA GAAGCTCGCT CCCTAGCTAA CTTTGGCTGT 
    ATATATATGG ACTGGGATGT TGAGATGGTG TGATGGGCTA AACCGGTTTA 
    ATATATTTCC TACTTTTTTT GTTTTCCTGA TTAGTCCGGT TAAGCCGTGT 
    AGTAGTTGGT CTTACATGGA CGGTTAACAA ATGAAAATCG GTTCTGATTT 
    GG

    Gene models with high sequence identity

    1. AT3G27420.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G27420.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR