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GT13019

CSHL Arabidopsis genetrap mutant lines

Original: GT13019

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT13019

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 16196230 [Map]; Strand: w
      • AT4G33770.1 - [+] show detail - Inositol 1,3,4-trisphosphate 5/6-kinase family protein
        Distance: 0; Region: exon1 (CDS)
      • AT4G33770.2 - [+] show detail - Inositol 1,3,4-trisphosphate 5/6-kinase family protein
        Distance: -873; Region: promoter
    Flanking Genome Sequence: GT13019 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCC CTATTTGGGA 
    CTCTTGCTTC CGGCGAAATC GAAACTGCCA GACTGAACCG TAATTTGGGG 
    ATTACGTCCA ATTTAGGGGT TTCCTGCGGT GGATTTGAAG ACTTTGCTAT 
    GAGATTCCAA GGGGAAAACA TGGTGCCATA CAAAGGTGAA GAGGAGGAGG 
    AGGAAGAAGA CCAAGTGGTG GTGAGCGAAA CGACGCCGTT TCAGTTTCAA 
    CAACCTTTGT TTCTGCAGCA GCAGCAGAAG CTCGTTGTTG GGTATGCTCT 
    GACTTCTAAG AAGAAGAAGA GTTTCTTGCA GCCCAAGCTT GAACTTCTTG 
    CTAGGTAACC AATAACAAAC CCAAAATGCT TCTTTGGAGT TATAAAGTTT 
    TGATTTTTCA TTGCAAAGTT TCCAAATTTG TTGAACAATC TTTTTTGGTT 
    CTGCTTTTTC TTTCCTGAGA GACGACTGTT CCTTTGTTGG CGTTTAAACA 
    TAACCGACAA ACTCTTTTCT ACTTTCAAAA AGATCTTTAG GACTTTGACA 
    TTTTCTTCCA GATTTGGTTC TTGTTTCCTT ACTCTTGTTT TGGTACCTAC 
    TATTGGTTTG CCTGATTCTA TGAGGACCAT TGCCACTTGC CATGTCTTGT 
    CACCTGCCAT GTTTTTGTCC TTA

AT4G33770.1

Model type
Protein coding
Short Description
Inositol 1,3,4-trisphosphate 5/6-kinase family protein
Computational Description
Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, inositol tetrakisphosphate 1-kinase activity, ATP binding; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 392 Blast hits to 387 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G33770.2

Model type
Protein coding
Short Description
Inositol 1,3,4-trisphosphate 5/6-kinase family protein
Computational Description
Inositol 1,3,4-trisphosphate 5/6-kinase family protein; FUNCTIONS IN: inositol or phosphatidylinositol kinase activity, magnesium ion binding, inositol-1,3,4-trisphosphate 5/6-kinase activity, inositol tetrakisphosphate 1-kinase activity, ATP binding; INVOLVED IN: inositol trisphosphate metabolic process; LOCATED IN: intracellular; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Inositol-tetrakisphosphate 1-kinase (InterPro:IPR017427), Inositol 1, 3, 4-trisphosphate 56-kinase (InterPro:IPR008656); BEST Arabidopsis thaliana protein match is: Inositol 1,3,4-trisphosphate 5/6-kinase family protein (TAIR:AT4G08170.2); Has 392 Blast hits to 387 proteins in 76 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 47 (source: NCBI BLink).
Link
InterPro Scan - TAIR