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GT13258

CSHL Arabidopsis genetrap mutant lines

Original: GT13258

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13258

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 1510373 [Map]; Strand: c
      • AT4G03415.1 - [+] show detail - Protein phosphatase 2C family protein
        Distance: -3873; Region: intergenic
      • AT4G03420.1 - [+] show detail - Protein of unknown function (DUF789)
        Distance: -1466; Region: intergenic
    Flanking Genome Sequence: GT13258 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTACGTTCAA TAACGTGATA 
    TTTATTAGAG ATTATTGATT TGCTTAATTA GTTACAAAAT CACACGTCAC 
    AACCATTTTT TCCCCAATAT TACGTCCAAA ACTGTTGATT CGTTTGATTT 
    TTATTGGCCG TCCAATGACT ATTTCGATAT ATATTATAAC TTCTTGTGTT 
    AGTCTATCTA TACTCTTATA TCATAAATTA GGAAAAGTAA GTACTGTATG 
    TATACGATCA ATGTATCTAA TAAACTTATT ACAAAACTAT AAAATATGCG 
    AGCAATAACG GCCAAATAGA GCGTAACTTT AGTTTTTTTT TGAGATACCT 
    AGTTTTAAAT ACCCTAAACT GTCAAGTTAC CTCAAATTGG CAAAACCTAA 
    TTTTGTGGAA AATTGAAAGG AAAATAATAT ATTTTTATTT CTATATTTGA 
    CTTCATTTAA ATGTTATTTT CGAAATAAAT CTTTACCTAC GATGATTTTA 
    TCAACCAGTT CAACTAATAA TCTTCTTTTT TGTATGTTAA GGTGCACTTA 
    TAATATATAT TTCTATATAT ATCACATGAA AGAAAAATAA AATAATTTAA 
    ATAATAACAC CTTTCAGAAC TAAGTTTTTT TCATATTAA

AT4G03415.1

Model type
Protein coding
Short Description
Protein phosphatase 2C family protein
Computational Description
Protein phosphatase 2C family protein; FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; LOCATED IN: plasma membrane; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: Protein phosphatase 2C family protein (TAIR:AT1G03590.1); Has 5680 Blast hits to 5679 proteins in 294 species: Archae - 0; Bacteria - 6; Metazoa - 1360; Fungi - 695; Plants - 2466; Viruses - 5; Other Eukaryotes - 1148 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G03420.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF789)
Computational Description
Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR