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GT13263

CSHL Arabidopsis genetrap mutant lines

Original: GT13263

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13263

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14630570 [Map]; Strand: w
      • AT2G34690.1 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13263 - 3-prime edge 
    ACAAACCTTG GCAACATAGT CCATTTCCGC AAACTTAAAA GCTATTCCAA 
    GGCAACCAAA GAGAGGCGAG ACCAGAGAGC AAGCGTGAGA GAATTGCGTT 
    ACAGGAACTT CCGGATTCGG TGAATTCACG ATGATTGCTA GTTTTTTGAA 
    AGCGGTTGAG ATTTTTCTCA GTGGCTTATC TGCTTCCGAA TCCGCCATGG 
    AAGATCTCTC TCCTTCTCTC TCTCTGTCGT CTTCTCCTGA TTAACAAGTT 
    TTGTTCTTGT GTGATTATTC CGATTGGTGT TCTGTGATTT GCCGCGGAAT 
    CTACTTTGCT GCAAGACGAC TCAAAAAGGC GGCGATTCGC TGATCACTAA 
    TTGTCTTTGT TTGGCG

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14630818 [Map]; Strand: w
      • AT2G34690.1 - [+] show detail - Glycolipid transfer protein (GLTP) family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT13263 - 5-prime edge 
    CTAATTTGAT GGACATGGAT GTTGTGTTTG TCTACCTGGA GGATGAATGT 
    TTTGGAAAAT GAAATGTTAA AACTTGTGAA TGTGACTATA GGTTGATGAT 
    CTTGTGAGGG CGTCGAGTTC GATATCGACA TTAGTGGTAA TGATGGACAA 
    AGATATTGAG GCAGATTGTG TAAGGAAAGC TGGTAGTCAT ACGAGAAACC 
    TTTTGAGGGT TAAGCGTGGT CTTGACATGG TCAAAGTTCT CTTTGAACAG 
    ATCATAGCTT CCGAGTAAGT GATTCTTCTG AACTCTCTCT TATTTGAGTT 
    CTTGTGAAAA TTTTGATCAA ATG

AT2G34690.1

Model type
Protein coding
Short Description
Glycolipid transfer protein (GLTP) family protein
Curator Summary
Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens.
Computational Description
ACCELERATED CELL DEATH 11 (ACD11); FUNCTIONS IN: sphingosine transmembrane transporter activity; INVOLVED IN: cell death, defense response to bacterium, incompatible interaction, response to salicylic acid stimulus; LOCATED IN: cytoplasm; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycolipid transfer protein, GLTP (InterPro:IPR014830); BEST Arabidopsis thaliana protein match is: Glycolipid transfer protein (GLTP) family protein (TAIR:AT4G39670.1); Has 490 Blast hits to 489 proteins in 97 species: Archae - 0; Bacteria - 0; Metazoa - 282; Fungi - 29; Plants - 164; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink).
Link
InterPro Scan - TAIR