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GT13270

CSHL Arabidopsis genetrap mutant lines

Original: GT13270

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13270

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25788322 [Map]; Strand: c
      • AT5G64520.3 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
        Distance: 0; Region: exon1 (CDS)
      • AT5G64520.1 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
        Distance: 0; Region: exon1 (CDS)
      • AT5G64520.2 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT13270 - 5-prime edge 
    CTACTTTCTC CCTGCTTCGC ATTTGAGATA ACCGGAGAAC ATCAAAGCGA 
    CAATCCAAAT CGAGAAACAA AACCAGTTTC CCTAATCCTC CATAGTGAAT 
    GCCGTTCCAC GTTTTAGGAA GAATGCAACT GATCGCAGCT TGAATCAGGA 
    TTTGAGTTTT CGCTGACGTA GATGCGCCGG TGATCTCGAC TACGTTCCCG 
    GCGCGTAAAG GTACACGGTG AAGTGGCGGA ATAAGCAGGA ACGCACGGTC 
    CTTAAGAACC CTTGATAACA TCTGCTTCGC CGTCTCGTCT CCGCGAATCC 
    AACTACGCGC TTCGTCATCT CCCATCGCTC GTCACGCGCT AGCCCCGGTG 
    TCACTCTTCC GACGTGAAAG TCTCGGCGAC TAGCCGGAGA TAATGGTGAA 
    TTAAGTATGG GCTTACAAGA GGAATGCCTT ACTAATGGGC CTTAACTAAG 
    TTATAATTTA GGCCCAATAT TATATATTAA ATGTGGGCTT GCAAATTTCC 
    CTTCGTTTT

AT5G64520.1

Model type
Protein coding
Short Description
homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description
homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 216 Blast hits to 214 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64520.2

Model type
Protein coding
Short Description
homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description
homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 215 Blast hits to 213 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G64520.3

Model type
Protein coding
Short Description
homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary
Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description
homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link
InterPro Scan - TAIR