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GT13277

CSHL Arabidopsis genetrap mutant lines

Original: GT13277

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13277

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 254684 [Map]; Strand: w
      • AT5G01680.1 - [+] show detail - cation/H+ exchanger 26
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT13277 - 3-prime edge 
    AACGGTAGAG GTATTTTACC GACCGTTACC GACCGTTTTC ATCCCTAGTC 
    GGGATGGCCG ACGGGACTGC AGCAGAACGA AGGCTCTGTC GCAACGTCCG 
    GAATGCCTCA CCTAGCTCCG TTGCGGTTCT AATGGACCAA GGACGGCTTC 
    CAGATTTCAA GAACATGGGA ACGGCGATGA AGAACGGCTC AATGAGGATC 
    AACATCTGTT CAATATTCCT CGGTGGAGCA GACGACCGTG AGACACTGGC 
    CTTTGCGGTT AGAATGACAA ACCAACCTTA CGTAAACCTA ACCGTTCTTA 
    AACTTGTCGA CGGTGAAAAC GTCTCACACC TAAACGACGT CGTAGAGAAA 
    AGACTCGATT TCAGAACCAT CGAAAAATTC CGTCAAGACA CCATGAACAA 
    ACACAATGTC GCTTTACGAG AGGTAAACAC ACAAGTCTTG ACTCCGTTTC 
    TCCGGTTTTC AAATCCGGAT TAGATTTAAC CGTTCA

AT5G01680.1

Model type
Protein coding
Short Description
cation/H+ exchanger 26
Curator Summary
member of Putative Na+/H+ antiporter family
Computational Description
cation/H+ exchanger 26 (CHX26); FUNCTIONS IN: monovalent cation:hydrogen antiporter activity, sodium:hydrogen antiporter activity; INVOLVED IN: cation transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, leaf, pollen tube; CONTAINS InterPro DOMAIN/s: Cation/H+ exchanger (InterPro:IPR006153); BEST Arabidopsis thaliana protein match is: cation/H+ exchanger 27 (TAIR:AT5G01690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR