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GT13312

CSHL Arabidopsis genetrap mutant lines

Original: GT13312

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13312

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 4437640 [Map]; Strand: w
      • AT3G13590.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: -306; Region: promoter
    Flanking Genome Sequence: GT13312 - 3-prime edge 
    AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCCCAAT TAGTCCTTAC 
    CATGAATGTA CAGAGACAAG TACAACTAGC TGTAATTGGA ATTGGAGTCA 
    TAAAAAAAGA TTAAATGTCA TAAATGTTAA CAGGTTTGGG AGACTAATTG 
    CAGCAACAAG GTACTACGGA AACTAAAATC TGGGAATTAT TTAGTTAATA 
    AATGACCCAC TATTGAAGTC

AT3G13590.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), DC1 (InterPro:IPR004146), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT5G42280.1); Has 1359 Blast hits to 591 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1347; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Link
InterPro Scan - TAIR