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Mutant Lines
GT13335

GT13335

CSHL Arabidopsis genetrap mutant lines

Original: GT13335

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT13335

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

3 prime edge [+] show sequence

Chromosome: 1; Position: 8398884 [Map]; Strand: c
- AT1G23740.1 - [+] show detail - Oxidoreductase, zinc-binding dehydrogenase family protein
  Distance: 0; Region: exon2 (CDS)

TTTTACCGAC CGTTACCGAC CGTTTTCATC CCCCGGCACC ATTAAGAACA 
AGAATGGACT TTCCGGCGGA GAATTCAGTC CTAACTAAAC CTTCATCAGC 
GGTTTCTATC GCCAACGGAA GCCCTGCAGC TTGCGCGAAA TCGATGTTTT 
TAGGTTTTAA AGCTAATAAC TTCTCTTCCA CGGCCGTGTA CTCCGCTAAA 
GAACCGAATT GCTTTGGACC TTCCAATGCT TTCTCGCTCA CGTTAGCATA 
AACTTCATCT CCTTCTTTGA AATCCTTCAC CGCACTTCCC ACTTTCACCA 
CCACTCCGGC AACGTCGTAT CCCGGAACAG TCTACTCCGA CGAAAGATTC 
AAAATGTTAA AGAAGCCGAA ACCTTCAAAG ACAGTGAGAG AGAGAGATTT 
GAATTTGCAT TTACCGGGAG AGGCGAATCA GTGGCTTTAA ATTTCCCCTG 
CCGTCTCTTA GCATCGACGG GATTAAGACC CGCCGCAACA ACTTTAATCA 
GAACCTGATC TTCTTTAATC TCCGGCACAG CAATGTTACT CTCCAGTTTC 
AAAACATCAA CTCCGCCGTA GTCACTATAC ACCCA

5 prime edge [+] show sequence

Chromosome: 2; Position: 9876504 [Map]; Strand: w
- AT2G23180.1 - [+] show detail - cytochrome P450, family 96, subfamily A, polypeptide 1
  Distance: 0; Region: exon1 (3UTR)
- AT2G23190.1 - [+] show detail - cytochrome P450, family 81, subfamily D, polypeptide 7
  Distance: -554; Region: promoter

TTCCTTCTAT TATTCTTCAC ATGAAGCATG GTCTTAAAGT TACAGTCACT 
AAGAGATCTA ATTTGCTCTG AATATTATGC ATTACTATTG TACTACATTT 
AGTATGAAAA TAATTATTAG GATTTTACAA AATACTTGAA TAAGAGGGGT 
AATGTTTACA ATAAAATTAA TATTTACTCT TCTTAGAATA CTAGGAGGCT 
TCCATAGTTT AAGAATAGTC GAATGTTACA TTTCTCTTTA GATTCATCCA 
AATTTTCTCG AATTCACAAC AATCTATATT TTTTTTTCTT TTCAATTTTT 
AATCTTTTGC TCTTATCGCT TCTGCTCCTT GTATATACGA AACAACATTA 
GTAACGTTCG ATTATACCTA CTCTAGCTAA CTAAGTAAGG ATCATAAGTT 
TTTGTAAAAC ATTAGTATAT AACGTTACTA ACTACTCTGT TATATACACC 
GTGAATCTCC ATATAGTGTA ATACTAATGT TGACTTATTA GTGTTGACTT 
TACAACATGT CTTTTCGTTT TGGTGTAAAT ACTAATGTTG ACTTATTACA 
CATGTTTATT TGTAATTAGC TG

AT1G23740.1

Model type: Protein coding
Short Description: Oxidoreductase, zinc-binding dehydrogenase family protein
Computational Description: Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G23180.1

Model type: Protein coding
Short Description: cytochrome P450, family 96, subfamily A, polypeptide 1
Curator Summary: member of CYP96A
Computational Description: "cytochrome P450, family 96, subfamily A, polypeptide 1" (CYP96A1); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 96, subfamily A, polypeptide 9 (TAIR:AT4G39480.1); Has 27906 Blast hits to 27823 proteins in 1447 species: Archae - 44; Bacteria - 2407; Metazoa - 10493; Fungi - 6010; Plants - 7891; Viruses - 3; Other Eukaryotes - 1058 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G23190.1

Model type: Protein coding
Short Description: cytochrome P450, family 81, subfamily D, polypeptide 7
Curator Summary: member of CYP81D
Computational Description: "cytochrome P450, family 81, subfamily D, polypeptide 7" (CYP81D7); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 81, subfamily D, polypeptide 6 (TAIR:AT2G23220.1); Has 35184 Blast hits to 35019 proteins in 1809 species: Archae - 61; Bacteria - 5655; Metazoa - 11706; Fungi - 7008; Plants - 9335; Viruses - 3; Other Eukaryotes - 1416 (source: NCBI BLink).
Link: InterPro Scan - TAIR